Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPL30P2-201ENST00000414021 291 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 MTCYBP8-201ENST00000422855 651 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC091390.3-201ENST00000426478 338 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AL358232.1-201ENST00000448030 501 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RPL9P32-201ENST00000464118 620 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RPL21P8-201ENST00000465083 535 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC092436.1-201ENST00000506450 503 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 APOOP4-201ENST00000513530 597 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RN7SKP13-201ENST00000515933 244 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-123P-201ENST00000516163 102 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AP005435.4-201ENST00000529514 284 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 BNIP3P9-201ENST00000603714 553 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AL670379.4-201ENST00000605279 254 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC022893.3-201ENST00000607665 437 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 MIR7151-201ENST00000617477 60 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC039056.2-201ENST00000622261 511 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 MTND1P37-201ENST00000636562 264 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC093536.2-201ENST00000565257 1406 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AC002546.1-201ENST00000588041 2504 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 UBE2L2-201ENST00000254302 429 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 NACAP2-201ENST00000318548 624 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-552P-201ENST00000362869 119 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RNU6ATAC-201ENST00000408749 126 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 SNORA3C-201ENST00000408792 125 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RN7SKP53-201ENST00000411337 315 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 USP9YP6-201ENST00000413550 854 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 BTF3L4P3-201ENST00000418879 476 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 MTND4LP11-201ENST00000422184 280 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RPL7P46-201ENST00000425129 740 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC006946.1-201ENST00000429106 328 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC011742.1-201ENST00000431448 434 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AL591704.1-201ENST00000432574 275 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AL162395.1-201ENST00000457882 422 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 snoU13.22-201ENST00000459428 104 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RPL23AP11-201ENST00000475260 469 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RPS15AP34-201ENST00000487776 387 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 RPL38P4-201ENST00000502376 214 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC117522.3-201ENST00000507974 584 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 OR5B10P-201ENST00000532869 642 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC012417.1-201ENST00000582307 1039 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC025946.2-201ENST00000603398 234 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AL020991.1-201ENST00000612314 373 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 MIR6500-201ENST00000622700 86 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC010733.2-201ENST00000589496 5702 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 AC007785.2-201ENST00000598627 1916 ntBASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CCDC144BQ3MJ40 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 FAM35BP-202ENST00000497389 3337 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 RNU4-6P-201ENST00000410804 122 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 RNA5SP111-201ENST00000411386 101 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 TMEM167AP1-201ENST00000423409 219 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 RBMY1KP-201ENST00000423480 476 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AL445584.1-201ENST00000431451 330 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 NDUFB4P6-201ENST00000436819 366 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC116353.2-201ENST00000505332 712 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC091885.1-201ENST00000506658 268 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms