Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC138853.1-201ENST00000503549 823 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AP003122.4-201ENST00000530980 758 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AP003385.6-201ENST00000531603 374 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 SETP7-201ENST00000552169 453 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC009063.1-201ENST00000563342 702 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC034268.2-201ENST00000571784 482 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC137800.2-201ENST00000574375 120 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 RNU6-87P-201ENST00000607561 108 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC107294.3-201ENST00000609211 526 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC103710.1-201ENST00000610003 901 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC013476.2-201ENST00000614456 459 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC091834.1-201ENST00000614543 472 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AC040168.1-201ENST00000623594 991 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
PDS5AQ29RF7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDS5AQ29RF7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 GABRG2-229ENST00000641017 3628 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 RNU6-356P-201ENST00000384140 107 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 RNU6-821P-201ENST00000390995 107 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 U3.42-201ENST00000408746 214 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC078974.1-201ENST00000411597 223 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AL353777.1-201ENST00000425552 326 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC022018.1-201ENST00000430685 241 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC009961.2-201ENST00000435771 251 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 FTH1P1-201ENST00000437933 532 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 RPL17P49-201ENST00000443728 411 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 SNORD121B-201ENST00000458838 81 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 SNORD108-201ENST00000459332 71 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 SRRM1P2-201ENST00000464531 1192 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 KLF3P2-201ENST00000465138 268 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC021382.1-201ENST00000483523 359 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 RPL9P33-201ENST00000484311 566 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 RN7SL633P-201ENST00000488974 297 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 RNA5SP356-201ENST00000515972 94 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC090136.1-201ENST00000520009 240 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AP003497.1-201ENST00000528472 562 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AL157394.1-201ENST00000562983 1224 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AL669831.4-202ENST00000590817 238 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 OR10AB1P-201ENST00000609613 938 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 AC092435.3-201ENST00000565538 3654 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 FARSBP1-201ENST00000435808 1778 ntBASIC3.51□□□□□ -1.85
PDS5AQ29RF7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PDS5AQ29RF7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 AC092125.1-201ENST00000562568 1995 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 Y_RNA.6-201ENST00000362350 114 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 RNU6-97P-201ENST00000363387 104 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 RNU5A-6P-201ENST00000384136 116 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 Y_RNA.493-201ENST00000384422 102 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 Y_RNA.516-201ENST00000384541 124 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 FCF1P10-201ENST00000407590 479 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 AC104651.1-201ENST00000427559 735 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 C8orf59P1-201ENST00000429930 303 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 CKS1BP5-201ENST00000434172 273 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 DNAJC19P4-201ENST00000440115 345 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 RPS24P13-201ENST00000442520 397 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 NIPA2P5-201ENST00000452282 464 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.5□□□□□ -1.85
PDS5AQ29RF7 RPS20P32-201ENST00000456044 356 ntBASIC3.5□□□□□ -1.85
PDS5AQ29RF7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms