Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL161734.1-201ENST00000609720 557 ntBASIC2.87□□□□□ -1.95
LMO4P61968 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO4P61968 AC103858.2-201ENST00000621471 543 ntBASIC2.87□□□□□ -1.95
LMO4P61968 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
LMO4P61968 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LMO4P61968 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.86□□□□□ -1.95
LMO4P61968 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 RNU6-50P-201ENST00000362356 103 ntBASIC2.86□□□□□ -1.95
LMO4P61968 RNU5E-1-201ENST00000362477 120 ntBASIC2.86□□□□□ -1.95
LMO4P61968 SNORD56.2-201ENST00000363242 71 ntBASIC2.86□□□□□ -1.95
LMO4P61968 RNU6-853P-201ENST00000364306 107 ntBASIC2.86□□□□□ -1.95
LMO4P61968 XGY1-201ENST00000381172 446 ntBASIC2.86□□□□□ -1.95
LMO4P61968 RNU6-1074P-201ENST00000383995 104 ntBASIC2.86□□□□□ -1.95
LMO4P61968 RPL23AP32-201ENST00000395315 459 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC078974.1-201ENST00000411597 223 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC127391.1-201ENST00000411737 98 ntBASIC2.86□□□□□ -1.95
LMO4P61968 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO4P61968 AC006989.1-201ENST00000427212 131 ntBASIC2.86□□□□□ -1.95
LMO4P61968 RPL23AP20-201ENST00000447965 421 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.86□□□□□ -1.95
LMO4P61968 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.86□□□□□ -1.95
LMO4P61968 HMGN2P7-201ENST00000456186 273 ntBASIC2.86□□□□□ -1.95
LMO4P61968 CEACAMP4-201ENST00000457676 421 ntBASIC2.86□□□□□ -1.95
LMO4P61968 SNRPGP3-201ENST00000469405 227 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AP001025.2-201ENST00000490908 477 ntBASIC2.86□□□□□ -1.95
LMO4P61968 NDUFB4P9-201ENST00000511646 388 ntBASIC2.86□□□□□ -1.95
LMO4P61968 LRRC34P2-201ENST00000514850 553 ntBASIC2.86□□□□□ -1.95
LMO4P61968 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.86□□□□□ -1.95
LMO4P61968 RN7SKP57-201ENST00000517248 293 ntBASIC2.86□□□□□ -1.95
LMO4P61968 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO4P61968 IGKV2-23-201ENST00000518729 323 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO4P61968 AC022861.1-201ENST00000522981 663 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO4P61968 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.86□□□□□ -1.95
LMO4P61968 AC123904.2-201ENST00000548059 300 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 YPEL5P2-201ENST00000605553 359 ntBASIC2.86□□□□□ -1.95
LMO4P61968 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.86□□□□□ -1.95
LMO4P61968 AL133173.2-201ENST00000614270 90 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC009159.1-201ENST00000618386 642 ntBASIC2.86□□□□□ -1.95
LMO4P61968 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 FER-210ENST00000628534 558 ntTSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 AC010149.2-201ENST00000637608 315 ntBASIC2.86□□□□□ -1.95
LMO4P61968 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LMO4P61968 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 AL356274.2-201ENST00000624379 3752 ntBASIC2.86□□□□□ -1.95
LMO4P61968 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LMO4P61968 MTND5P17-201ENST00000418405 1603 ntBASIC2.86□□□□□ -1.95
LMO4P61968 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LMO4P61968 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.85□□□□□ -1.95
LMO4P61968 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 NCAPGP1-201ENST00000505112 1814 ntBASIC2.85□□□□□ -1.95
LMO4P61968 Y_RNA.381-201ENST00000365666 102 ntBASIC2.85□□□□□ -1.95
LMO4P61968 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 RNU1-39P-201ENST00000383897 165 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC068050.1-201ENST00000394891 380 ntBASIC2.85□□□□□ -1.95
LMO4P61968 RNA5SP129-201ENST00000410276 118 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 SNRPEP10-201ENST00000420249 274 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL137014.1-201ENST00000420490 1226 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL353777.1-201ENST00000425552 326 ntBASIC2.85□□□□□ -1.95
LMO4P61968 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.85□□□□□ -1.95
LMO4P61968 GTF2IP20-201ENST00000431663 360 ntBASIC2.85□□□□□ -1.95
LMO4P61968 RPL7P54-201ENST00000438336 674 ntBASIC2.85□□□□□ -1.95
LMO4P61968 HSPE1P28-201ENST00000443139 211 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC005297.2-201ENST00000450430 606 ntBASIC2.85□□□□□ -1.95
LMO4P61968 FDX1P2-201ENST00000450769 375 ntBASIC2.85□□□□□ -1.95
LMO4P61968 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 AC104563.1-201ENST00000476147 376 ntBASIC2.85□□□□□ -1.95
LMO4P61968 RPL21P13-201ENST00000488305 481 ntBASIC2.85□□□□□ -1.95
LMO4P61968 RPL39P36-201ENST00000490784 156 ntBASIC2.85□□□□□ -1.95
LMO4P61968 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 AC079382.1-201ENST00000493346 557 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC034222.1-201ENST00000494052 532 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 MLLT10P2-201ENST00000506434 249 ntBASIC2.85□□□□□ -1.95
LMO4P61968 FCF1P8-201ENST00000510322 597 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC021146.1-201ENST00000511202 716 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.85□□□□□ -1.95
LMO4P61968 Vault.3-201ENST00000516676 95 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.85□□□□□ -1.95
LMO4P61968 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.85□□□□□ -1.95
LMO4P61968 OR5AL2P-201ENST00000532185 920 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC018630.1-201ENST00000541376 925 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms