Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RPS17P13-201ENST00000448974 407 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.68□□□□□ -1.66
ERVFC1P60507 AC022493.2-201ENST00000506122 481 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 RNA5SP49-201ENST00000516450 115 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 RNU4-77P-201ENST00000516692 156 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 RNU6-307P-201ENST00000516743 106 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AF186190.1-201ENST00000517470 480 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 AC100870.1-201ENST00000522035 505 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 RANP3-201ENST00000530970 276 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.68□□□□□ -1.66
ERVFC1P60507 AC007375.1-201ENST00000554513 578 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AC106782.4-201ENST00000568264 210 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AC005899.2-201ENST00000584353 90 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 ATP1B3P1-201ENST00000605365 821 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.68□□□□□ -1.66
ERVFC1P60507 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AC138627.2-201ENST00000624202 601 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 BMS1P21-201ENST00000634565 365 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 AL606534.2-204ENST00000635008 178 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERVFC1P60507 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 AC100778.3-201ENST00000580060 1750 ntBASIC4.68□□□□□ -1.66
ERVFC1P60507 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ERVFC1P60507 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERVFC1P60507 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.68□□□□□ -1.66
ERVFC1P60507 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ERVFC1P60507 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ERVFC1P60507 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 AL137003.2-201ENST00000606924 2538 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.67□□□□□ -1.66
ERVFC1P60507 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ERVFC1P60507 RNU6-1078P-201ENST00000364522 103 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 SNORA16.2-201ENST00000390991 127 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.67□□□□□ -1.66
ERVFC1P60507 AC243428.1-201ENST00000421099 264 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AC099799.1-201ENST00000439809 192 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 BTF3P6-201ENST00000448054 499 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 HMGB3P30-201ENST00000457863 606 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 snoU13.7-201ENST00000459220 104 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 RN7SL132P-201ENST00000478131 296 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AC068781.1-201ENST00000488231 618 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AC026801.1-201ENST00000497178 464 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.67□□□□□ -1.66
ERVFC1P60507 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.67□□□□□ -1.66
ERVFC1P60507 MIR4716-201ENST00000579628 84 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AC011494.1-201ENST00000596454 237 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 Z98751.3-201ENST00000604447 521 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 SNORD58B-201ENST00000607313 66 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.67□□□□□ -1.66
ERVFC1P60507 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AC243312.2-201ENST00000623340 601 ntBASIC4.67□□□□□ -1.66
ERVFC1P60507 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
ERVFC1P60507 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.67□□□□□ -1.66
ERVFC1P60507 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERVFC1P60507 AC074029.4-201ENST00000624796 1859 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 GABPAP-201ENST00000419271 1356 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 AC015813.6-201ENST00000624409 5808 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ERVFC1P60507 RNA5SP391-201ENST00000363456 119 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 RNU6-450P-201ENST00000364654 107 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 Y_RNA.350-201ENST00000365409 98 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
ERVFC1P60507 Y_RNA.473-201ENST00000384333 102 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 SNORD70.1-201ENST00000391007 85 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 RNU6-754P-201ENST00000391166 107 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 AL590632.1-201ENST00000424289 371 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 AL451062.2-201ENST00000427515 271 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.66□□□□□ -1.66
ERVFC1P60507 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.66□□□□□ -1.66
ERVFC1P60507 NOTCH2P1-201ENST00000443481 624 ntBASIC4.66□□□□□ -1.66
ERVFC1P60507 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.66□□□□□ -1.66
ERVFC1P60507 RPS27AP13-201ENST00000498403 237 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms