Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN20P56880 AP002826.1-201ENST00000608835 315 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AC010133.1-201ENST00000615809 842 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AC048347.1-201ENST00000624621 427 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN20P56880 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN20P56880 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN20P56880 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN20P56880 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN20P56880 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN20P56880 RNU6-39P-201ENST00000384344 107 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 MIR1290-201ENST00000408735 78 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN20P56880 CRYBB2P1-203ENST00000415709 538 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 RPL27AP8-201ENST00000424277 446 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN20P56880 RPL7L1P10-201ENST00000427790 463 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN20P56880 MED13P1-201ENST00000428342 171 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 C8orf59P1-201ENST00000429930 303 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC002486.1-201ENST00000435098 391 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 AC079781.2-201ENST00000446424 169 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC125238.1-201ENST00000448842 249 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 PSPHP1-201ENST00000450062 261 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC093392.2-201ENST00000450682 337 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 SNRPGP6-201ENST00000451124 220 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC023598.1-201ENST00000472521 361 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC105914.1-201ENST00000511798 226 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 RNU6-410P-201ENST00000517006 107 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN20P56880 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 SUB1P2-201ENST00000556401 297 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 ZNF519P2-201ENST00000557032 169 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN20P56880 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN20P56880 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN20P56880 AP003465.2-201ENST00000602571 373 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AP002360.4-201ENST00000606980 481 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC007684.1-201ENST00000609671 477 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 U4.5-201ENST00000617137 123 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLDN20P56880 MIR6863-201ENST00000636112 90 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC068137.3-201ENST00000639191 341 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AC073869.6-201ENST00000640656 341 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 OR5H6-203ENST00000642105 978 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 AL732372.2-225ENST00000642124 456 ntBASIC3.22□□□□□ -1.89
CLDN20P56880 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN20P56880 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN20P56880 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN20P56880 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN20P56880 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CLDN20P56880 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CLDN20P56880 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN20P56880 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
CLDN20P56880 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN20P56880 Y_RNA.1-201ENST00000352915 104 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 RNU5E-6P-201ENST00000365574 115 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 RNU6-517P-201ENST00000384362 110 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 RNU6-456P-201ENST00000384493 107 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 MIR558-201ENST00000384920 94 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 RNA5SP129-201ENST00000410276 118 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 FCF1P9-201ENST00000412546 282 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN20P56880 CYCSP4-201ENST00000429682 331 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AC073063.1-201ENST00000434352 607 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 MTND1P4-201ENST00000435196 415 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 RPL23AP22-201ENST00000437556 453 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN20P56880 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN20P56880 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN20P56880 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN20P56880 RN7SL432P-201ENST00000484057 298 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 SLC25A15P5-201ENST00000508033 253 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN20P56880 SCARNA24.1-201ENST00000516465 137 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN20P56880 OR5B10P-201ENST00000532869 642 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN20P56880 AL355836.1-201ENST00000555951 870 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN20P56880 AC005951.2-201ENST00000576282 495 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.21□□□□□ -1.9
CLDN20P56880 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CLDN20P56880 AC098848.2-201ENST00000588023 330 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL670379.6-201ENST00000603753 252 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL670379.11-201ENST00000604059 253 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AC008162.1-201ENST00000604718 254 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms