Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MTCYBP17-201ENST00000503579 789 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 SUMO2P6-201ENST00000505273 288 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AC116337.1-201ENST00000509680 687 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AC113155.1-201ENST00000511141 769 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 RNA5SP471-201ENST00000516971 106 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 COX6CP5-201ENST00000527162 228 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AC123904.3-201ENST00000547218 814 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CLDN6P56747 AC069304.2-201ENST00000605154 435 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AL158211.2-201ENST00000607282 395 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AC024560.3-201ENST00000608482 349 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CLDN6P56747 AC002550.2-201ENST00000621246 394 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AC079228.1-201ENST00000624774 1049 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN6P56747 AC022336.2-201ENST00000568966 2538 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN6P56747 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLDN6P56747 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLDN6P56747 RPL21P132-201ENST00000331267 462 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 RNU5E-8P-201ENST00000363502 116 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 Y_RNA.234-201ENST00000364409 97 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 RNU6-741P-201ENST00000383889 107 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 HMGB1P17-201ENST00000403495 628 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AL513475.1-201ENST00000406602 315 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.28□□□□□ -2.04
CLDN6P56747 AC107081.1-201ENST00000414975 361 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN6P56747 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN6P56747 Z82210.1-201ENST00000440037 231 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 CBWD4P-201ENST00000445695 655 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 DPPA3P1-201ENST00000448050 469 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN6P56747 HMGN2P23-201ENST00000456759 269 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN6P56747 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CLDN6P56747 AC138853.1-201ENST00000503549 823 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN6P56747 RNU6-1225P-201ENST00000516336 65 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 RNU6-840P-201ENST00000517275 65 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 OR4R2P-201ENST00000530815 597 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN6P56747 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN6P56747 AC061975.8-201ENST00000587058 721 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AC008507.2-201ENST00000588402 1176 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AC060766.3-201ENST00000591442 263 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AC103710.4-201ENST00000609301 899 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN6P56747 AL603758.1-201ENST00000618654 241 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 AL353997.5-201ENST00000618886 171 ntBASIC2.28□□□□□ -2.04
CLDN6P56747 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN6P56747 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLDN6P56747 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
CLDN6P56747 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN6P56747 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN6P56747 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN6P56747 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLDN6P56747 Y_RNA.238-201ENST00000364441 102 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLDN6P56747 MTCO1P56-201ENST00000401674 224 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 AL096701.2-201ENST00000416920 238 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 MRPS36P1-201ENST00000421291 307 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC007919.1-201ENST00000429380 217 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 MTND4P6-201ENST00000438297 472 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 BNIP3P2-201ENST00000441221 577 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AP1S2P1-201ENST00000457344 379 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC126182.1-201ENST00000478134 357 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC108734.3-201ENST00000481241 1165 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 RN7SKP31-201ENST00000516354 278 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 SUB1P1-201ENST00000524415 382 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CLDN6P56747 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN6P56747 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 AL391261.3-201ENST00000557194 520 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 TRAV28-201ENST00000557548 323 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 AC087465.1-201ENST00000560574 245 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN6P56747 MIR3912-201ENST00000577566 105 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 MIR3117-201ENST00000584034 78 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 HMGN2P15-201ENST00000585707 270 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN6P56747 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN6P56747 AC104237.2-201ENST00000612456 443 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AL136981.2-201ENST00000617319 734 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN6P56747 AP000943.4-201ENST00000622912 357 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 AC110994.2-201ENST00000635481 492 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 MIR4275-201ENST00000636486 87 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN6P56747 CCT4P2-201ENST00000233836 1548 ntBASIC2.27□□□□□ -2.05
CLDN6P56747 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms