Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.94□□□□□ -2.1
CMC4P56277 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.94□□□□□ -2.1
CMC4P56277 OR5BM1P-201ENST00000512021 366 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AC105185.1-201ENST00000518705 535 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.94□□□□□ -2.1
CMC4P56277 AL133271.1-201ENST00000538229 291 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.94□□□□□ -2.1
CMC4P56277 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CMC4P56277 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.94□□□□□ -2.1
CMC4P56277 AC010546.1-201ENST00000569391 485 ntBASIC1.94□□□□□ -2.1
CMC4P56277 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.94□□□□□ -2.1
CMC4P56277 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.94□□□□□ -2.1
CMC4P56277 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.94□□□□□ -2.1
CMC4P56277 AC060766.3-201ENST00000591442 263 ntBASIC1.94□□□□□ -2.1
CMC4P56277 VN1R82P-201ENST00000601481 356 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AC091057.2-201ENST00000602594 792 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AL391001.1-201ENST00000602747 715 ntBASIC1.94□□□□□ -2.1
CMC4P56277 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.94□□□□□ -2.1
CMC4P56277 AC080013.3-201ENST00000606839 578 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AL139022.2-201ENST00000606934 443 ntBASIC1.94□□□□□ -2.1
CMC4P56277 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CMC4P56277 AP000676.3-201ENST00000623299 569 ntBASIC1.94□□□□□ -2.1
CMC4P56277 AC099063.3-201ENST00000642066 185 ntBASIC1.94□□□□□ -2.1
CMC4P56277 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CMC4P56277 AL161431.1-201ENST00000618966 4205 ntBASIC1.94□□□□□ -2.1
CMC4P56277 MTND5P33-201ENST00000571250 1450 ntBASIC1.94□□□□□ -2.1
CMC4P56277 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CMC4P56277 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CMC4P56277 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 FTLP6-201ENST00000355274 422 ntBASIC1.93□□□□□ -2.1
CMC4P56277 SNORA68.1-201ENST00000364537 132 ntBASIC1.93□□□□□ -2.1
CMC4P56277 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CMC4P56277 RNU1-39P-201ENST00000383897 165 ntBASIC1.93□□□□□ -2.1
CMC4P56277 RNU6-140P-201ENST00000384566 108 ntBASIC1.93□□□□□ -2.1
CMC4P56277 MIR627-201ENST00000384979 97 ntBASIC1.93□□□□□ -2.1
CMC4P56277 MIR767-201ENST00000390228 109 ntBASIC1.93□□□□□ -2.1
CMC4P56277 FO393413.1-201ENST00000402892 195 ntBASIC1.93□□□□□ -2.1
CMC4P56277 MIR320C1-201ENST00000408566 88 ntBASIC1.93□□□□□ -2.1
CMC4P56277 RNU2-25P-201ENST00000411041 191 ntBASIC1.93□□□□□ -2.1
CMC4P56277 MTCO2P8-201ENST00000412213 658 ntBASIC1.93□□□□□ -2.1
CMC4P56277 RPL17P12-201ENST00000413391 526 ntBASIC1.93□□□□□ -2.1
CMC4P56277 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.93□□□□□ -2.1
CMC4P56277 AL513477.1-202ENST00000417061 214 ntBASIC1.93□□□□□ -2.1
CMC4P56277 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.93□□□□□ -2.1
CMC4P56277 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 USP12PX-201ENST00000432383 1057 ntBASIC1.93□□□□□ -2.1
CMC4P56277 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.93□□□□□ -2.1
CMC4P56277 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CMC4P56277 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.93□□□□□ -2.1
CMC4P56277 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.93□□□□□ -2.1
CMC4P56277 KC877373.1-201ENST00000479066 408 ntBASIC1.93□□□□□ -2.1
CMC4P56277 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.93□□□□□ -2.1
CMC4P56277 RNU6-927P-201ENST00000516199 100 ntBASIC1.93□□□□□ -2.1
CMC4P56277 AC022634.1-201ENST00000520765 532 ntBASIC1.93□□□□□ -2.1
CMC4P56277 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CMC4P56277 UBTFL10-201ENST00000528532 562 ntBASIC1.93□□□□□ -2.1
CMC4P56277 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CMC4P56277 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CMC4P56277 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.93□□□□□ -2.1
CMC4P56277 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.93□□□□□ -2.1
CMC4P56277 AC005498.1-201ENST00000592125 465 ntBASIC1.93□□□□□ -2.1
CMC4P56277 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.93□□□□□ -2.1
CMC4P56277 AC026790.2-201ENST00000606282 430 ntBASIC1.93□□□□□ -2.1
CMC4P56277 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 AC079395.3-201ENST00000615161 484 ntBASIC1.93□□□□□ -2.1
CMC4P56277 UCA1.1-201ENST00000620952 75 ntBASIC1.93□□□□□ -2.1
CMC4P56277 AC103798.2-201ENST00000624292 632 ntBASIC1.93□□□□□ -2.1
CMC4P56277 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.93□□□□□ -2.1
CMC4P56277 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
CMC4P56277 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CMC4P56277 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CMC4P56277 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.92□□□□□ -2.1
CMC4P56277 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.92□□□□□ -2.1
CMC4P56277 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CMC4P56277 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.92□□□□□ -2.1
CMC4P56277 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
CMC4P56277 AC062016.1-201ENST00000355719 319 ntBASIC1.92□□□□□ -2.1
CMC4P56277 Y_RNA.111-201ENST00000363248 100 ntBASIC1.92□□□□□ -2.1
CMC4P56277 RNU6-853P-201ENST00000364306 107 ntBASIC1.92□□□□□ -2.1
CMC4P56277 SNORD114-30-201ENST00000364448 72 ntBASIC1.92□□□□□ -2.1
CMC4P56277 RNU6-925P-201ENST00000384629 104 ntBASIC1.92□□□□□ -2.1
CMC4P56277 RNU6-906P-201ENST00000384700 70 ntBASIC1.92□□□□□ -2.1
CMC4P56277 RNU6-1242P-201ENST00000391052 103 ntBASIC1.92□□□□□ -2.1
CMC4P56277 RPL17P50-201ENST00000396131 546 ntBASIC1.92□□□□□ -2.1
CMC4P56277 AL139039.1-201ENST00000401900 692 ntBASIC1.92□□□□□ -2.1
CMC4P56277 AL031121.1-201ENST00000406553 254 ntBASIC1.92□□□□□ -2.1
CMC4P56277 USP9YP13-201ENST00000417797 480 ntBASIC1.92□□□□□ -2.1
CMC4P56277 HMGB1P49-201ENST00000418882 569 ntBASIC1.92□□□□□ -2.1
CMC4P56277 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms