Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MTND2P24-201ENST00000453434 806 ntBASIC2.58□□□□□ -2
LIM2P55344 RPL21P8-201ENST00000465083 535 ntBASIC2.58□□□□□ -2
LIM2P55344 AC072039.1-201ENST00000477611 581 ntBASIC2.58□□□□□ -2
LIM2P55344 DSTNP2-201ENST00000504533 515 ntBASIC2.58□□□□□ -2
LIM2P55344 MTND4LP22-201ENST00000508209 276 ntBASIC2.58□□□□□ -2
LIM2P55344 Y_RNA.717-201ENST00000517106 92 ntBASIC2.58□□□□□ -2
LIM2P55344 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.58□□□□□ -2
LIM2P55344 CASP1P1-201ENST00000526345 212 ntBASIC2.58□□□□□ -2
LIM2P55344 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.58□□□□□ -2
LIM2P55344 AL133153.1-201ENST00000557756 303 ntBASIC2.58□□□□□ -2
LIM2P55344 HMGB1P6-201ENST00000569046 646 ntBASIC2.58□□□□□ -2
LIM2P55344 AC138761.3-201ENST00000579993 334 ntBASIC2.58□□□□□ -2
LIM2P55344 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
LIM2P55344 ELOCP29-201ENST00000588193 334 ntBASIC2.58□□□□□ -2
LIM2P55344 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.58□□□□□ -2
LIM2P55344 AL357094.1-201ENST00000603845 844 ntBASIC2.58□□□□□ -2
LIM2P55344 HSPE1P7-201ENST00000604681 321 ntBASIC2.58□□□□□ -2
LIM2P55344 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.58□□□□□ -2
LIM2P55344 AC091965.4-201ENST00000607691 587 ntBASIC2.58□□□□□ -2
LIM2P55344 AC004223.4-201ENST00000612426 332 ntBASIC2.58□□□□□ -2
LIM2P55344 AP002791.1-201ENST00000623291 381 ntBASIC2.58□□□□□ -2
LIM2P55344 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.58□□□□□ -2
LIM2P55344 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.58□□□□□ -2
LIM2P55344 AC006927.3-201ENST00000638789 384 ntBASIC2.58□□□□□ -2
LIM2P55344 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.58□□□□□ -2
LIM2P55344 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIM2P55344 AC007785.2-201ENST00000598627 1916 ntBASIC2.58□□□□□ -2
LIM2P55344 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIM2P55344 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
LIM2P55344 MTND5P7-201ENST00000413558 1798 ntBASIC2.57□□□□□ -2
LIM2P55344 AC092435.3-201ENST00000565538 3654 ntBASIC2.57□□□□□ -2
LIM2P55344 OR5J1P-201ENST00000313544 939 ntBASIC2.57□□□□□ -2
LIM2P55344 SNORA80A-201ENST00000363922 136 ntBASIC2.57□□□□□ -2
LIM2P55344 RNU6-7-201ENST00000364784 107 ntBASIC2.57□□□□□ -2
LIM2P55344 RNU6-8-201ENST00000365467 107 ntBASIC2.57□□□□□ -2
LIM2P55344 MIR19A-201ENST00000384878 82 ntBASIC2.57□□□□□ -2
LIM2P55344 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
LIM2P55344 SAR1AP2-201ENST00000392696 594 ntBASIC2.57□□□□□ -2
LIM2P55344 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
LIM2P55344 AL513331.1-201ENST00000411908 397 ntBASIC2.57□□□□□ -2
LIM2P55344 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.57□□□□□ -2
LIM2P55344 USP9YP26-201ENST00000421008 661 ntBASIC2.57□□□□□ -2
LIM2P55344 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.57□□□□□ -2
LIM2P55344 CBWD4P-201ENST00000445695 655 ntBASIC2.57□□□□□ -2
LIM2P55344 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 AC092798.1-201ENST00000458542 409 ntBASIC2.57□□□□□ -2
LIM2P55344 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
LIM2P55344 AC006445.2-201ENST00000510061 472 ntBASIC2.57□□□□□ -2
LIM2P55344 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
LIM2P55344 RNU6-1003P-201ENST00000517099 105 ntBASIC2.57□□□□□ -2
LIM2P55344 NRON-201ENST00000517270 370 ntBASIC2.57□□□□□ -2
LIM2P55344 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.57□□□□□ -2
LIM2P55344 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.57□□□□□ -2
LIM2P55344 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.57□□□□□ -2
LIM2P55344 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.57□□□□□ -2
LIM2P55344 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.57□□□□□ -2
LIM2P55344 AC068790.3-201ENST00000602988 553 ntBASIC2.57□□□□□ -2
LIM2P55344 AC079089.3-201ENST00000603094 673 ntBASIC2.57□□□□□ -2
LIM2P55344 AP000403.1-201ENST00000603349 851 ntBASIC2.57□□□□□ -2
LIM2P55344 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.57□□□□□ -2
LIM2P55344 AL139344.1-201ENST00000605228 195 ntBASIC2.57□□□□□ -2
LIM2P55344 SDR42E1P2-201ENST00000614861 481 ntBASIC2.57□□□□□ -2
LIM2P55344 AC131159.1-201ENST00000621854 213 ntBASIC2.57□□□□□ -2
LIM2P55344 CR381653.2-201ENST00000624041 768 ntBASIC2.57□□□□□ -2
LIM2P55344 LRRC77P-213ENST00000637727 880 ntBASIC2.57□□□□□ -2
LIM2P55344 AL049641.1-201ENST00000441055 1948 ntBASIC2.57□□□□□ -2
LIM2P55344 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
LIM2P55344 AC091564.4-201ENST00000533934 2194 ntBASIC2.57□□□□□ -2
LIM2P55344 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.57□□□□□ -2
LIM2P55344 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LIM2P55344 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
LIM2P55344 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
LIM2P55344 OR4G2P-202ENST00000641004 1759 ntBASIC2.56□□□□□ -2
LIM2P55344 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LIM2P55344 AC092125.1-201ENST00000562568 1995 ntBASIC2.56□□□□□ -2
LIM2P55344 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LIM2P55344 NDUFB4P4-201ENST00000404822 243 ntBASIC2.56□□□□□ -2
LIM2P55344 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.56□□□□□ -2
LIM2P55344 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.56□□□□□ -2
LIM2P55344 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.56□□□□□ -2
LIM2P55344 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.56□□□□□ -2
LIM2P55344 TRIAP1P1-201ENST00000427062 225 ntBASIC2.56□□□□□ -2
LIM2P55344 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.56□□□□□ -2
LIM2P55344 Z82210.1-201ENST00000440037 231 ntBASIC2.56□□□□□ -2
LIM2P55344 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.56□□□□□ -2
LIM2P55344 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.56□□□□□ -2
LIM2P55344 RPL30P6-201ENST00000475925 342 ntBASIC2.56□□□□□ -2
LIM2P55344 AC096576.1-201ENST00000489014 359 ntBASIC2.56□□□□□ -2
LIM2P55344 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
LIM2P55344 AC055855.1-201ENST00000489563 579 ntBASIC2.56□□□□□ -2
LIM2P55344 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.56□□□□□ -2
LIM2P55344 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.56□□□□□ -2
LIM2P55344 RNU6-1256P-201ENST00000516539 103 ntBASIC2.56□□□□□ -2
LIM2P55344 RNA5SP291-201ENST00000517222 105 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms