Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.56□□□□□ -2
ACLYP53396 Z98742.2-201ENST00000431564 187 ntBASIC2.56□□□□□ -2
ACLYP53396 AP000949.1-201ENST00000438328 629 ntBASIC2.56□□□□□ -2
ACLYP53396 AL714022.1-201ENST00000439897 151 ntBASIC2.56□□□□□ -2
ACLYP53396 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.56□□□□□ -2
ACLYP53396 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.56□□□□□ -2
ACLYP53396 AC116337.2-201ENST00000477662 156 ntBASIC2.56□□□□□ -2
ACLYP53396 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.56□□□□□ -2
ACLYP53396 AC068587.2-201ENST00000478386 781 ntBASIC2.56□□□□□ -2
ACLYP53396 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.56□□□□□ -2
ACLYP53396 XKRY-201ENST00000510392 1100 ntBASIC2.56□□□□□ -2
ACLYP53396 RNU6-1282P-201ENST00000516735 96 ntBASIC2.56□□□□□ -2
ACLYP53396 HSPE1P20-201ENST00000538133 289 ntBASIC2.56□□□□□ -2
ACLYP53396 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.56□□□□□ -2
ACLYP53396 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.56□□□□□ -2
ACLYP53396 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.56□□□□□ -2
ACLYP53396 AC009977.1-201ENST00000586015 570 ntBASIC2.56□□□□□ -2
ACLYP53396 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.56□□□□□ -2
ACLYP53396 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
ACLYP53396 AL357080.1-201ENST00000617394 239 ntBASIC2.56□□□□□ -2
ACLYP53396 AL353997.5-201ENST00000618886 171 ntBASIC2.56□□□□□ -2
ACLYP53396 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.56□□□□□ -2
ACLYP53396 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACLYP53396 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACLYP53396 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ACLYP53396 AC026241.1-201ENST00000517873 2142 ntBASIC2.56□□□□□ -2
ACLYP53396 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ACLYP53396 RNU6-1257P-201ENST00000384625 110 ntBASIC2.55□□□□□ -2
ACLYP53396 RNA5SP354-201ENST00000391247 136 ntBASIC2.55□□□□□ -2
ACLYP53396 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.55□□□□□ -2
ACLYP53396 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.55□□□□□ -2
ACLYP53396 MTND4P13-201ENST00000402078 1023 ntBASIC2.55□□□□□ -2
ACLYP53396 OR4K11P-201ENST00000431829 904 ntBASIC2.55□□□□□ -2
ACLYP53396 GTF2IP3-201ENST00000433887 494 ntBASIC2.55□□□□□ -2
ACLYP53396 AL022578.1-201ENST00000439330 1433 ntBASIC2.55□□□□□ -2
ACLYP53396 BMI1P1-201ENST00000445879 941 ntBASIC2.55□□□□□ -2
ACLYP53396 MTND2P24-201ENST00000453434 806 ntBASIC2.55□□□□□ -2
ACLYP53396 HMGN2P23-201ENST00000456759 269 ntBASIC2.55□□□□□ -2
ACLYP53396 RNU7-136P-201ENST00000458819 69 ntBASIC2.55□□□□□ -2
ACLYP53396 RNU7-23P-201ENST00000459465 62 ntBASIC2.55□□□□□ -2
ACLYP53396 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.55□□□□□ -2
ACLYP53396 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.55□□□□□ -2
ACLYP53396 AC116337.1-201ENST00000509680 687 ntBASIC2.55□□□□□ -2
ACLYP53396 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
ACLYP53396 MTND5P4-201ENST00000514978 288 ntBASIC2.55□□□□□ -2
ACLYP53396 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.55□□□□□ -2
ACLYP53396 AP002748.2-201ENST00000528671 348 ntBASIC2.55□□□□□ -2
ACLYP53396 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.55□□□□□ -2
ACLYP53396 AL132857.1-201ENST00000555180 708 ntBASIC2.55□□□□□ -2
ACLYP53396 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.55□□□□□ -2
ACLYP53396 AC007785.2-201ENST00000598627 1916 ntBASIC2.55□□□□□ -2
ACLYP53396 AP000787.2-201ENST00000604432 568 ntBASIC2.55□□□□□ -2
ACLYP53396 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
ACLYP53396 AL445264.1-201ENST00000621719 171 ntBASIC2.55□□□□□ -2
ACLYP53396 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
ACLYP53396 AL159972.1-201ENST00000625150 448 ntBASIC2.55□□□□□ -2
ACLYP53396 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.55□□□□□ -2
ACLYP53396 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
ACLYP53396 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
ACLYP53396 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
ACLYP53396 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
ACLYP53396 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
ACLYP53396 RNU6-343P-201ENST00000364709 104 ntBASIC2.54□□□□□ -2
ACLYP53396 MIR767-201ENST00000390228 109 ntBASIC2.54□□□□□ -2
ACLYP53396 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.54□□□□□ -2
ACLYP53396 RNU6-298P-201ENST00000390888 96 ntBASIC2.54□□□□□ -2
ACLYP53396 RNU6-193P-201ENST00000410977 107 ntBASIC2.54□□□□□ -2
ACLYP53396 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.54□□□□□ -2
ACLYP53396 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
ACLYP53396 AC099548.1-201ENST00000421443 426 ntBASIC2.54□□□□□ -2
ACLYP53396 AC009414.1-201ENST00000427200 443 ntBASIC2.54□□□□□ -2
ACLYP53396 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
ACLYP53396 AC092155.2-201ENST00000454675 477 ntBASIC2.54□□□□□ -2
ACLYP53396 AC087588.1-201ENST00000462203 316 ntBASIC2.54□□□□□ -2
ACLYP53396 LINC00888-204ENST00000487386 421 ntBASIC2.54□□□□□ -2
ACLYP53396 AC113347.3-201ENST00000509113 148 ntBASIC2.54□□□□□ -2
ACLYP53396 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.54□□□□□ -2
ACLYP53396 RNU6-714P-201ENST00000516963 103 ntBASIC2.54□□□□□ -2
ACLYP53396 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.54□□□□□ -2
ACLYP53396 AC005832.3-201ENST00000537929 631 ntBASIC2.54□□□□□ -2
ACLYP53396 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.54□□□□□ -2
ACLYP53396 AL132657.2-201ENST00000564417 358 ntBASIC2.54□□□□□ -2
ACLYP53396 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.54□□□□□ -2
ACLYP53396 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.54□□□□□ -2
ACLYP53396 VN1R83P-201ENST00000595685 445 ntBASIC2.54□□□□□ -2
ACLYP53396 BX664608.1-201ENST00000610519 487 ntBASIC2.54□□□□□ -2
ACLYP53396 AC123767.1-202ENST00000620407 817 ntBASIC2.54□□□□□ -2
ACLYP53396 AC104985.3-201ENST00000623479 597 ntBASIC2.54□□□□□ -2
ACLYP53396 MIR4275-201ENST00000636486 87 ntBASIC2.54□□□□□ -2
ACLYP53396 AC006378.2-201ENST00000623178 2476 ntBASIC2.54□□□□□ -2
ACLYP53396 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ACLYP53396 AL079343.1-201ENST00000572358 1771 ntBASIC2.54□□□□□ -2
ACLYP53396 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
ACLYP53396 AC092881.1-201ENST00000638218 2733 ntBASIC2.53□□□□□ -2
ACLYP53396 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
ACLYP53396 RNU5E-8P-201ENST00000363502 116 ntBASIC2.53□□□□□ -2
ACLYP53396 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
ACLYP53396 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
ACLYP53396 GSTA9P-201ENST00000406231 611 ntBASIC2.53□□□□□ -2
ACLYP53396 AL590084.1-201ENST00000407885 387 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms