Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Y_RNA.466-201ENST00000384294 113 ntBASIC1.75□□□□□ -2.13
NUP98P52948 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP98P52948 AL009174.1-201ENST00000426577 416 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AL451074.3-201ENST00000437709 472 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.75□□□□□ -2.13
NUP98P52948 MTCO2P9-201ENST00000503214 694 ntBASIC1.75□□□□□ -2.13
NUP98P52948 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP98P52948 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP98P52948 AC093281.2-201ENST00000510153 597 ntBASIC1.75□□□□□ -2.13
NUP98P52948 RNU6-27P-201ENST00000516146 107 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP98P52948 AP000790.1-201ENST00000528891 737 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC139103.1-201ENST00000534696 1030 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.75□□□□□ -2.13
NUP98P52948 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP98P52948 AC025588.3-201ENST00000604182 274 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC245884.12-201ENST00000615364 59 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC008568.2-201ENST00000623862 2313 ntBASIC1.75□□□□□ -2.13
NUP98P52948 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NUP98P52948 AC093536.2-201ENST00000565257 1406 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
NUP98P52948 Y_RNA.796-201ENST00000364268 102 ntBASIC1.75□□□□□ -2.13
NUP98P52948 Y_RNA.799-201ENST00000364992 102 ntBASIC1.75□□□□□ -2.13
NUP98P52948 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP98P52948 MIR518E-201ENST00000385252 88 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC090774.1-201ENST00000435925 246 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP98P52948 AC104073.1-201ENST00000451988 151 ntBASIC1.75□□□□□ -2.13
NUP98P52948 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
NUP98P52948 CASP1P1-201ENST00000526345 212 ntBASIC1.75□□□□□ -2.13
NUP98P52948 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP98P52948 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP98P52948 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP98P52948 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP98P52948 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP98P52948 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP98P52948 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.74□□□□□ -2.13
NUP98P52948 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP98P52948 RNU6-989P-201ENST00000362756 107 ntBASIC1.74□□□□□ -2.13
NUP98P52948 MIR144-201ENST00000384886 86 ntBASIC1.74□□□□□ -2.13
NUP98P52948 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.74□□□□□ -2.13
NUP98P52948 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.74□□□□□ -2.13
NUP98P52948 EZH2P1-201ENST00000431167 291 ntBASIC1.74□□□□□ -2.13
NUP98P52948 MTND1P33-201ENST00000446251 917 ntBASIC1.74□□□□□ -2.13
NUP98P52948 AC234775.1-201ENST00000454247 670 ntBASIC1.74□□□□□ -2.13
NUP98P52948 AL359385.1-201ENST00000456509 365 ntBASIC1.74□□□□□ -2.13
NUP98P52948 CBX3P3-201ENST00000508108 532 ntBASIC1.74□□□□□ -2.13
NUP98P52948 RNU6-1282P-201ENST00000516735 96 ntBASIC1.74□□□□□ -2.13
NUP98P52948 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.74□□□□□ -2.13
NUP98P52948 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP98P52948 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.74□□□□□ -2.13
NUP98P52948 AC080078.3-201ENST00000605407 463 ntBASIC1.74□□□□□ -2.13
NUP98P52948 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NUP98P52948 Y_RNA.116-201ENST00000363292 103 ntBASIC1.73□□□□□ -2.13
NUP98P52948 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.73□□□□□ -2.13
NUP98P52948 RNU6-198P-201ENST00000384258 104 ntBASIC1.73□□□□□ -2.13
NUP98P52948 RNU6-441P-201ENST00000384545 106 ntBASIC1.73□□□□□ -2.13
NUP98P52948 RNU6-1072P-201ENST00000384703 107 ntBASIC1.73□□□□□ -2.13
NUP98P52948 RNU6-443P-201ENST00000384780 107 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 RNU6-420P-201ENST00000458780 107 ntBASIC1.73□□□□□ -2.13
NUP98P52948 RPL23AP41-201ENST00000484754 458 ntBASIC1.73□□□□□ -2.13
NUP98P52948 RNU6-760P-201ENST00000516078 97 ntBASIC1.73□□□□□ -2.13
NUP98P52948 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.73□□□□□ -2.13
NUP98P52948 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NUP98P52948 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 MIR3616-201ENST00000584070 92 ntBASIC1.73□□□□□ -2.13
NUP98P52948 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NUP98P52948 MIR6504-201ENST00000613520 61 ntBASIC1.73□□□□□ -2.13
NUP98P52948 UCA1.1-201ENST00000620952 75 ntBASIC1.73□□□□□ -2.13
NUP98P52948 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
NUP98P52948 MIR203B-201ENST00000636080 86 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AL590396.2-201ENST00000636511 1041 ntBASIC1.73□□□□□ -2.13
NUP98P52948 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.73□□□□□ -2.13
NUP98P52948 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
NUP98P52948 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NUP98P52948 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.73□□□□□ -2.13
NUP98P52948 RAB11AP1-201ENST00000442978 646 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AL121871.1-201ENST00000443413 436 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AC104164.3-201ENST00000467363 1258 ntBASIC1.73□□□□□ -2.13
NUP98P52948 VPS26AP1-201ENST00000483197 979 ntBASIC1.73□□□□□ -2.13
NUP98P52948 RPS27P26-201ENST00000494583 239 ntBASIC1.73□□□□□ -2.13
NUP98P52948 MTCO1P31-201ENST00000506355 492 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AC034244.1-201ENST00000507687 207 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AC023824.2-201ENST00000566185 400 ntBASIC1.73□□□□□ -2.13
NUP98P52948 MIR5694-201ENST00000581190 76 ntBASIC1.73□□□□□ -2.13
NUP98P52948 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP98P52948 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP98P52948 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP98P52948 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP98P52948 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP98P52948 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NUP98P52948 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP98P52948 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP98P52948 AC233981.2-201ENST00000611524 1614 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AC130650.2-201ENST00000618736 2403 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms