Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.39□□□□□ -1.87
CLCNKAP51800 MIR3167-201ENST00000579623 85 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AP003465.2-201ENST00000602571 373 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC126118.1-201ENST00000607744 628 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AL450472.3-201ENST00000615578 367 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AL158209.2-201ENST00000619266 216 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 SEPT14P19-203ENST00000633205 211 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCNKAP51800 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCNKAP51800 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCNKAP51800 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCNKAP51800 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCNKAP51800 RNU5E-8P-201ENST00000363502 116 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 SNORD46.1-201ENST00000364139 104 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 RNU6-882P-201ENST00000391025 103 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCNKAP51800 MIR548F1-201ENST00000408667 84 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 RNU2-43P-201ENST00000410306 190 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 FCF1P9-201ENST00000412546 282 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 ELOCP4-201ENST00000420090 333 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC133104.1-201ENST00000429100 218 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCNKAP51800 MRPS31P2-201ENST00000451581 518 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AC108059.3-201ENST00000456388 214 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AC093899.1-201ENST00000457984 376 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 RNU7-59P-201ENST00000459101 61 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 RPS23P3-201ENST00000470993 430 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC004924.1-201ENST00000480160 781 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AL117351.2-201ENST00000513571 157 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 RN7SKP60-201ENST00000516985 239 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 IGKV2-26-201ENST00000518305 343 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.38□□□□□ -1.87
CLCNKAP51800 NCAPGP2-201ENST00000557911 754 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCNKAP51800 AL022099.1-201ENST00000604551 712 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AL136363.1-201ENST00000605349 337 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC019226.1-201ENST00000625666 515 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AL157786.1-207ENST00000627771 695 ntBASIC3.38□□□□□ -1.87
CLCNKAP51800 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLCNKAP51800 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCNKAP51800 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CLCNKAP51800 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLCNKAP51800 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCNKAP51800 RNA5SP267-201ENST00000364893 126 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCNKAP51800 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLCNKAP51800 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCNKAP51800 UBE2FP1-201ENST00000416536 447 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 RPS15AP6-201ENST00000420703 385 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCNKAP51800 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CLCNKAP51800 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCNKAP51800 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AC008155.2-201ENST00000464337 397 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AC091153.1-201ENST00000466297 402 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 RPS3AP14-201ENST00000483907 780 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 RPL32P34-201ENST00000486380 400 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 RPS15AP36-201ENST00000492022 382 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AC093278.1-201ENST00000494700 600 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 PCBP2P3-201ENST00000509726 843 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 FCF1P8-201ENST00000510322 597 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AF213884.2-201ENST00000510417 903 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 RNU6-64P-201ENST00000517119 105 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCNKAP51800 AC124947.2-202ENST00000552735 133 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCNKAP51800 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCNKAP51800 AL845331.3-202ENST00000562856 261 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 TPRKBP2-201ENST00000565969 475 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.37□□□□□ -1.87
CLCNKAP51800 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCNKAP51800 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCNKAP51800 SRGNP1-201ENST00000603392 451 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 MIR6130-201ENST00000619419 109 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AC022149.2-201ENST00000621061 203 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 AL360181.4-201ENST00000621752 134 ntBASIC3.37□□□□□ -1.87
CLCNKAP51800 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CLCNKAP51800 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCNKAP51800 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CLCNKAP51800 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCNKAP51800 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCNKAP51800 AC032011.1-201ENST00000611703 1549 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms