Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCN3P51790 SNORA40.3-201ENST00000390964 122 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AL109755.1-201ENST00000401791 649 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 FCF1P10-201ENST00000407590 479 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 MTCYBP5-201ENST00000423752 1135 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 OR2B8P-201ENST00000432841 938 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 MTND3P21-201ENST00000433774 331 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC024082.2-201ENST00000434771 238 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCN3P51790 RPL27AP5-201ENST00000469428 449 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC004924.1-201ENST00000480160 781 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC135721.1-201ENST00000497954 479 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCN3P51790 AC105914.1-201ENST00000511798 226 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 RN7SKP298-201ENST00000515950 94 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCN3P51790 AL133271.1-201ENST00000538229 291 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC123904.2-201ENST00000548059 300 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AL133153.1-201ENST00000557756 303 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCN3P51790 MED28P6-201ENST00000558776 231 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 MIR3921-201ENST00000577308 85 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCN3P51790 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC090578.1-201ENST00000604955 591 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CLCN3P51790 SDAD1P2-201ENST00000441308 2028 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCN3P51790 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 GABPAP-201ENST00000419271 1356 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCN3P51790 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLCN3P51790 OR4G2P-201ENST00000328113 903 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 RNU6-50P-201ENST00000362356 103 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 RN7SKP226-201ENST00000364912 300 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCN3P51790 SNORA7.4-201ENST00000384249 137 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 CCNG1P1-201ENST00000406783 885 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.5□□□□□ -1.85
CLCN3P51790 RPL27AP8-201ENST00000424277 446 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLCN3P51790 MTATP6P13-201ENST00000438531 667 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 MTND6P13-201ENST00000443510 523 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 RPL17P49-201ENST00000443728 411 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.5□□□□□ -1.85
CLCN3P51790 AL162389.1-201ENST00000449233 177 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC003071.1-201ENST00000451219 789 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 FGF7P6-202ENST00000451282 293 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCN3P51790 AC004801.2-202ENST00000463559 283 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 S100A11P2-201ENST00000467589 312 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCN3P51790 SNORA31.22-201ENST00000517204 135 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AP003122.4-201ENST00000530980 758 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AP002453.2-201ENST00000533503 320 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCN3P51790 AC125611.2-201ENST00000551907 647 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 RPL21P5-201ENST00000554662 472 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC136619.2-201ENST00000563361 631 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 ZNF192P1-203ENST00000565888 810 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCN3P51790 MIR3146-201ENST00000580367 79 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC009977.1-201ENST00000586015 570 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCN3P51790 BDH2P1-201ENST00000602288 736 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 KC877982.1-201ENST00000602313 470 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AP001330.4-201ENST00000604350 154 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 RBM11P1-201ENST00000604951 799 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC098614.4-201ENST00000607601 462 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC090970.3-201ENST00000612566 866 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AL592295.2-201ENST00000612578 206 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC091834.1-201ENST00000614543 472 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC090517.2-201ENST00000614966 680 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 U6atac.1-201ENST00000616025 117 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC112204.3-201ENST00000623822 332 ntBASIC3.5□□□□□ -1.85
CLCN3P51790 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCN3P51790 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCN3P51790 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLCN3P51790 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCN3P51790 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCN3P51790 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCN3P51790 AL672296.1-201ENST00000427780 2158 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLCN3P51790 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms