Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PRDX4P1-201ENST00000507189 574 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 AL359273.1-201ENST00000510918 627 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD12P35452 AC022968.1-201ENST00000567372 442 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 MIR3921-201ENST00000577308 85 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD12P35452 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD12P35452 AC007363.1-201ENST00000604736 620 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 AC004908.2-201ENST00000609090 574 ntBASIC3.84□□□□□ -1.79
HOXD12P35452 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD12P35452 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD12P35452 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD12P35452 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD12P35452 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD12P35452 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.8
HOXD12P35452 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD12P35452 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 Y_RNA.159-201ENST00000363674 87 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 MIR1290-201ENST00000408735 78 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 RNU2-62P-201ENST00000410868 191 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 SSXP9-201ENST00000417503 292 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 UBE2D3P2-201ENST00000424409 445 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 TXNP1-201ENST00000441872 371 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 RPL23AP20-201ENST00000447965 421 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC010655.1-201ENST00000449336 292 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 RNU7-59P-201ENST00000459101 61 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 RPL32P34-201ENST00000486380 400 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 AP000857.1-201ENST00000532151 543 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AP003034.1-201ENST00000534621 422 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXD12P35452 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 AC025678.1-201ENST00000567861 338 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 MIR3200-201ENST00000580767 85 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC006504.3-201ENST00000586818 523 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 Z84480.1-201ENST00000605131 311 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC008277.2-201ENST00000605196 797 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC008962.1-201ENST00000605729 304 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC104458.1-201ENST00000608243 463 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AP001596.2-201ENST00000608410 312 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AL355073.2-201ENST00000612106 557 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 AC006111.3-201ENST00000622137 383 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD12P35452 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HOXD12P35452 AC009812.4-201ENST00000569134 1805 ntBASIC3.83□□□□□ -1.8
HOXD12P35452 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXD12P35452 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
HOXD12P35452 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD12P35452 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD12P35452 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD12P35452 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 RNU6-483P-201ENST00000384088 108 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 MIR218-2-201ENST00000385006 110 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 MIR634-201ENST00000385208 97 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 RNU6-516P-201ENST00000411381 104 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 ATP5A1P2-201ENST00000412323 255 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 USP9YP6-201ENST00000413550 854 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 USP9YP27-201ENST00000418455 438 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AL353193.1-201ENST00000421444 268 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 TMEM167AP1-201ENST00000423409 219 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD12P35452 MTCO1P20-201ENST00000425366 358 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 AL159987.2-201ENST00000432754 307 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD12P35452 WASF1P1-201ENST00000447560 1131 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 NFU1P2-201ENST00000448700 469 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD12P35452 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXD12P35452 AC026784.1-201ENST00000507986 352 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 AC114797.1-201ENST00000514003 728 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 Y_RNA.693-201ENST00000516641 110 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms