Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC006064.5-201ENST00000541782 248 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF4P23510 HIF1AP1-201ENST00000553642 175 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 AL163153.1-201ENST00000554223 283 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.64□□□□□ -1.83
TNFSF4P23510 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF4P23510 AL355598.1-201ENST00000604169 202 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 ARF4P1-201ENST00000605447 541 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 AC114781.5-201ENST00000615297 108 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 AL391261.4-201ENST00000616012 481 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 AL357559.1-201ENST00000622228 274 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 MIR4727-201ENST00000622232 55 ntBASIC3.64□□□□□ -1.83
TNFSF4P23510 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF4P23510 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TNFSF4P23510 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF4P23510 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF4P23510 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF4P23510 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF4P23510 AC233263.6-201ENST00000631132 1963 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 RPL32P3-201ENST00000359025 275 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 RNU1-14P-201ENST00000362759 152 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 RNU6-328P-201ENST00000390887 106 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 SNORD37.1-201ENST00000390968 65 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 MIR1277-201ENST00000408536 78 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 RNU6-908P-201ENST00000410160 94 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 RNA5SP36-201ENST00000410197 133 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 HMGN2P30-201ENST00000423237 256 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AL157831.1-201ENST00000426134 473 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFSF4P23510 USP9YP28-201ENST00000435142 589 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 ABCF2P2-201ENST00000450549 296 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 FGF7P6-202ENST00000451282 293 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AC010099.1-201ENST00000455434 375 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 RPL7P19-201ENST00000469948 618 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AC008958.1-201ENST00000511047 682 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 RNA5SP49-201ENST00000516450 115 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 RNU6-711P-201ENST00000517255 106 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 SNORA59B-202ENST00000578183 701 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF4P23510 MIR548AC-201ENST00000585049 88 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 MIR378J-201ENST00000611988 109 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 MIR6716-201ENST00000613413 80 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 SNORD39.4-201ENST00000620099 78 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 AC103858.2-201ENST00000621471 543 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 MIR3653-201ENST00000625572 110 ntBASIC3.63□□□□□ -1.83
TNFSF4P23510 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFSF4P23510 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF4P23510 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF4P23510 AL354685.2-201ENST00000448218 1447 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFSF4P23510 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 AL354719.1-201ENST00000406535 843 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC108032.1-201ENST00000416706 207 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AL139095.3-201ENST00000419672 1203 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 SNRPEP10-201ENST00000420249 274 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms