Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 OR5P1P-201ENST00000299512 925 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RNU6-254P-201ENST00000363377 107 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RNU1-83P-201ENST00000363426 164 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RNA5SP366-201ENST00000365454 123 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 Y_RNA.399-201ENST00000383955 105 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RNU6-1179P-201ENST00000384667 107 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.17□□□□□ -1.58
ERCC3P19447 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC3P19447 NDUFB4P7-201ENST00000423198 363 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC018644.1-201ENST00000429934 551 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC069285.2-201ENST00000440210 275 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC008264.1-201ENST00000447612 367 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC104472.2-201ENST00000469035 601 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 UQCRHP4-201ENST00000471686 272 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RPS20P22-201ENST00000473700 357 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RPL7P43-201ENST00000478876 753 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC009901.1-201ENST00000506703 541 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC3P19447 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC3P19447 SNORA14.1-201ENST00000516113 141 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 RNU6-1088P-201ENST00000516850 104 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC3P19447 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC3P19447 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.17□□□□□ -1.58
ERCC3P19447 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC3P19447 AC090115.3-201ENST00000553218 849 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 AC135507.2-201ENST00000612443 309 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC3P19447 MIR3653-201ENST00000625572 110 ntBASIC5.17□□□□□ -1.58
ERCC3P19447 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC3P19447 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERCC3P19447 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ERCC3P19447 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ERCC3P19447 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.16□□□□□ -1.58
ERCC3P19447 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.16□□□□□ -1.58
ERCC3P19447 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ERCC3P19447 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 Y_RNA.301-201ENST00000364990 103 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 DEFB109C-201ENST00000382575 264 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 DEFB109B-201ENST00000382656 264 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 Y_RNA.534-201ENST00000384599 112 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 RPS26P8-201ENST00000393490 348 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 MIR548F5-201ENST00000408421 86 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 RPS20P15-201ENST00000412792 311 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.16□□□□□ -1.58
ERCC3P19447 AL139396.1-201ENST00000421137 167 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC3P19447 AC009237.8-201ENST00000445492 379 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AC107399.1-201ENST00000451226 265 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.16□□□□□ -1.58
ERCC3P19447 DHFRP3-201ENST00000455595 559 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 VN1R17P-201ENST00000472048 1090 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.16□□□□□ -1.58
ERCC3P19447 SUMO2P6-201ENST00000505273 288 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 HMGN1P13-201ENST00000505795 138 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 RNU6-277P-201ENST00000516272 106 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 RNA5SP468-201ENST00000516782 93 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AC090281.1-201ENST00000523019 276 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AP003730.1-201ENST00000524605 285 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 HPRT1P3-201ENST00000539521 576 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.16□□□□□ -1.58
ERCC3P19447 AC093227.2-201ENST00000589357 285 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AC113139.1-201ENST00000605049 239 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 RNU4-89P-201ENST00000607443 133 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AC090132.2-201ENST00000615881 347 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 AC092435.4-201ENST00000623012 4159 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC3P19447 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
ERCC3P19447 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ERCC3P19447 CPHL1P-201ENST00000461341 3407 ntBASIC5.16□□□□□ -1.58
ERCC3P19447 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC3P19447 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.15□□□□□ -1.58
ERCC3P19447 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.58
ERCC3P19447 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
ERCC3P19447 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
ERCC3P19447 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC3P19447 RNU1-132P-201ENST00000364300 164 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 RNU6-1303P-201ENST00000364841 107 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC3P19447 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC3P19447 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC3P19447 RNU6-741P-201ENST00000383889 107 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms