Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD44P16070 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CD44P16070 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CD44P16070 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.6□□□□□ -1.35
CD44P16070 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.6□□□□□ -1.35
CD44P16070 AC027575.3-201ENST00000583058 2747 ntBASIC6.6□□□□□ -1.35
CD44P16070 AC114774.1-201ENST00000507410 1770 ntBASIC6.6□□□□□ -1.35
CD44P16070 Y_RNA.78-201ENST00000362970 110 ntBASIC6.6□□□□□ -1.35
CD44P16070 SNORD32A-201ENST00000364805 84 ntBASIC6.6□□□□□ -1.35
CD44P16070 Y_RNA.341-201ENST00000365341 102 ntBASIC6.6□□□□□ -1.35
CD44P16070 Y_RNA.456-201ENST00000384232 111 ntBASIC6.6□□□□□ -1.35
CD44P16070 SNORA36C-201ENST00000384289 132 ntBASIC6.6□□□□□ -1.35
CD44P16070 ENSAP1-201ENST00000392855 326 ntBASIC6.6□□□□□ -1.35
CD44P16070 RNU6-855P-201ENST00000410395 104 ntBASIC6.6□□□□□ -1.35
CD44P16070 FAM183DP-201ENST00000421987 399 ntBASIC6.6□□□□□ -1.35
CD44P16070 DDX39BP1-205ENST00000422507 192 ntBASIC6.6□□□□□ -1.35
CD44P16070 RPL23AP95-201ENST00000426806 265 ntBASIC6.6□□□□□ -1.35
CD44P16070 GAPDHP59-201ENST00000435908 267 ntBASIC6.6□□□□□ -1.35
CD44P16070 CYCSP12-201ENST00000437729 300 ntBASIC6.6□□□□□ -1.35
CD44P16070 SNORA31.19-201ENST00000517079 126 ntBASIC6.6□□□□□ -1.35
CD44P16070 AP004609.2-201ENST00000532177 190 ntBASIC6.6□□□□□ -1.35
CD44P16070 TOMM20P1-201ENST00000534518 427 ntBASIC6.6□□□□□ -1.35
CD44P16070 MRPS21P9-201ENST00000571150 257 ntBASIC6.6□□□□□ -1.35
CD44P16070 SCARNA4-202ENST00000625402 129 ntBASIC6.6□□□□□ -1.35
CD44P16070 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CD44P16070 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CD44P16070 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD44P16070 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD44P16070 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CD44P16070 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.6□□□□□ -1.35
CD44P16070 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.6□□□□□ -1.35
CD44P16070 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.6□□□□□ -1.35
CD44P16070 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.6□□□□□ -1.35
CD44P16070 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.59□□□□□ -1.35
CD44P16070 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CD44P16070 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CD44P16070 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CD44P16070 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CD44P16070 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CD44P16070 ASNSP1-201ENST00000518311 1939 ntBASIC6.59□□□□□ -1.35
CD44P16070 MIR302B-201ENST00000362188 73 ntBASIC6.59□□□□□ -1.35
CD44P16070 Y_RNA.73-201ENST00000362910 113 ntBASIC6.59□□□□□ -1.35
CD44P16070 RNU1-134P-201ENST00000362935 165 ntBASIC6.59□□□□□ -1.35
CD44P16070 Y_RNA.310-201ENST00000365063 113 ntBASIC6.59□□□□□ -1.35
CD44P16070 MT-TC-201ENST00000387405 66 ntBASIC6.59□□□□□ -1.35
CD44P16070 AC005522.1-201ENST00000395416 346 ntBASIC6.59□□□□□ -1.35
CD44P16070 RPL21P3-201ENST00000395517 478 ntBASIC6.59□□□□□ -1.35
CD44P16070 AL354868.1-201ENST00000417077 482 ntBASIC6.59□□□□□ -1.35
CD44P16070 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.59□□□□□ -1.35
CD44P16070 AC234781.4-201ENST00000419384 244 ntBASIC6.59□□□□□ -1.35
CD44P16070 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.59□□□□□ -1.35
CD44P16070 CALM2P4-201ENST00000430810 426 ntBASIC6.59□□□□□ -1.35
CD44P16070 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.59□□□□□ -1.35
CD44P16070 UQCRHP4-201ENST00000471686 272 ntBASIC6.59□□□□□ -1.35
CD44P16070 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.59□□□□□ -1.35
CD44P16070 AC131238.1-201ENST00000617135 328 ntBASIC6.59□□□□□ -1.35
CD44P16070 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.59□□□□□ -1.35
CD44P16070 AC127024.6-201ENST00000621598 424 ntBASIC6.59□□□□□ -1.35
CD44P16070 AC000095.2-202ENST00000637415 154 ntBASIC6.59□□□□□ -1.35
CD44P16070 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.59□□□□□ -1.35
CD44P16070 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CD44P16070 ADAM24P-201ENST00000398655 2101 ntBASIC6.59□□□□□ -1.35
CD44P16070 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CD44P16070 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CD44P16070 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.59□□□□□ -1.36
CD44P16070 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CD44P16070 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.58□□□□□ -1.36
CD44P16070 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
CD44P16070 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 Y_RNA.93-201ENST00000363066 109 ntBASIC6.58□□□□□ -1.36
CD44P16070 SNORD115-30-201ENST00000364117 82 ntBASIC6.58□□□□□ -1.36
CD44P16070 MIR551B-201ENST00000384984 96 ntBASIC6.58□□□□□ -1.36
CD44P16070 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CD44P16070 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 RPL35AP3-201ENST00000414680 288 ntBASIC6.58□□□□□ -1.36
CD44P16070 RPL12P12-201ENST00000424633 501 ntBASIC6.58□□□□□ -1.36
CD44P16070 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.58□□□□□ -1.36
CD44P16070 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC6.58□□□□□ -1.36
CD44P16070 FABP5P15-201ENST00000453566 214 ntBASIC6.58□□□□□ -1.36
CD44P16070 RPL12P39-201ENST00000455456 496 ntBASIC6.58□□□□□ -1.36
CD44P16070 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC6.58□□□□□ -1.36
CD44P16070 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.58□□□□□ -1.36
CD44P16070 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.58□□□□□ -1.36
CD44P16070 RNU2-13P-201ENST00000515909 113 ntBASIC6.58□□□□□ -1.36
CD44P16070 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CD44P16070 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.58□□□□□ -1.36
CD44P16070 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.58□□□□□ -1.36
CD44P16070 MT1CP-201ENST00000567054 174 ntBASIC6.58□□□□□ -1.36
CD44P16070 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC6.58□□□□□ -1.36
CD44P16070 IPO5P1-202ENST00000600039 287 ntBASIC6.58□□□□□ -1.36
CD44P16070 AC068768.2-201ENST00000602352 343 ntBASIC6.58□□□□□ -1.36
CD44P16070 uc_338.29-201ENST00000615099 168 ntBASIC6.58□□□□□ -1.36
CD44P16070 AC099654.15-201ENST00000639802 509 ntBASIC6.58□□□□□ -1.36
CD44P16070 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CD44P16070 Z73965.1-201ENST00000623412 2297 ntBASIC6.58□□□□□ -1.36
CD44P16070 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms