Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RANP8-201ENST00000444720 713 ntBASIC4.84□□□□□ -1.63
NID1P14543 AC073587.1-201ENST00000447093 876 ntBASIC4.84□□□□□ -1.63
NID1P14543 RPL7L1P1-201ENST00000448259 785 ntBASIC4.84□□□□□ -1.63
NID1P14543 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.84□□□□□ -1.63
NID1P14543 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.84□□□□□ -1.63
NID1P14543 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.84□□□□□ -1.63
NID1P14543 Y_RNA.679-201ENST00000516416 91 ntBASIC4.84□□□□□ -1.63
NID1P14543 IGKV2D-36-201ENST00000518643 226 ntBASIC4.84□□□□□ -1.63
NID1P14543 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.84□□□□□ -1.63
NID1P14543 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.84□□□□□ -1.63
NID1P14543 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
NID1P14543 RPL10P14-201ENST00000565265 298 ntBASIC4.84□□□□□ -1.63
NID1P14543 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NID1P14543 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.84□□□□□ -1.63
NID1P14543 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
NID1P14543 RMST_4.1-201ENST00000616886 107 ntBASIC4.84□□□□□ -1.63
NID1P14543 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.84□□□□□ -1.63
NID1P14543 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
NID1P14543 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NID1P14543 AC005332.5-201ENST00000591222 2919 ntBASIC4.84□□□□□ -1.63
NID1P14543 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NID1P14543 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NID1P14543 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NID1P14543 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.84□□□□□ -1.64
NID1P14543 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NID1P14543 STX3-208ENST00000641815 3236 ntBASIC4.84□□□□□ -1.64
NID1P14543 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NID1P14543 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.83□□□□□ -1.64
NID1P14543 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 RNU6-326P-201ENST00000365480 107 ntBASIC4.83□□□□□ -1.64
NID1P14543 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 AC019155.1-201ENST00000382242 574 ntBASIC4.83□□□□□ -1.64
NID1P14543 Y_RNA.418-201ENST00000384029 102 ntBASIC4.83□□□□□ -1.64
NID1P14543 RNU1-74P-201ENST00000384108 171 ntBASIC4.83□□□□□ -1.64
NID1P14543 Y_RNA.534-201ENST00000384599 112 ntBASIC4.83□□□□□ -1.64
NID1P14543 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NID1P14543 RNU6-1168P-201ENST00000390831 104 ntBASIC4.83□□□□□ -1.64
NID1P14543 RNU6-918P-201ENST00000391219 106 ntBASIC4.83□□□□□ -1.64
NID1P14543 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.83□□□□□ -1.64
NID1P14543 RNU6-1135P-201ENST00000411083 103 ntBASIC4.83□□□□□ -1.64
NID1P14543 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.83□□□□□ -1.64
NID1P14543 RPL23AP36-201ENST00000413895 458 ntBASIC4.83□□□□□ -1.64
NID1P14543 AL096701.2-201ENST00000416920 238 ntBASIC4.83□□□□□ -1.64
NID1P14543 AF186996.5-201ENST00000418098 904 ntBASIC4.83□□□□□ -1.64
NID1P14543 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.83□□□□□ -1.64
NID1P14543 AL590762.4-201ENST00000425885 253 ntBASIC4.83□□□□□ -1.64
NID1P14543 RPL7L1P9-201ENST00000431298 745 ntBASIC4.83□□□□□ -1.64
NID1P14543 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.83□□□□□ -1.64
NID1P14543 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.83□□□□□ -1.64
NID1P14543 AP001324.2-201ENST00000461163 319 ntBASIC4.83□□□□□ -1.64
NID1P14543 RN7SL860P-201ENST00000473738 223 ntBASIC4.83□□□□□ -1.64
NID1P14543 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.83□□□□□ -1.64
NID1P14543 MIR892C-201ENST00000516410 77 ntBASIC4.83□□□□□ -1.64
NID1P14543 RNU6-1012P-201ENST00000516606 109 ntBASIC4.83□□□□□ -1.64
NID1P14543 Y_RNA.706-201ENST00000516933 99 ntBASIC4.83□□□□□ -1.64
NID1P14543 RNA5SP373-201ENST00000517271 95 ntBASIC4.83□□□□□ -1.64
NID1P14543 AC025755.1-201ENST00000521306 278 ntBASIC4.83□□□□□ -1.64
NID1P14543 AC104581.2-201ENST00000572227 430 ntBASIC4.83□□□□□ -1.64
NID1P14543 MIR4659A-201ENST00000580269 81 ntBASIC4.83□□□□□ -1.64
NID1P14543 AP000787.2-201ENST00000604432 568 ntBASIC4.83□□□□□ -1.64
NID1P14543 AL450472.3-201ENST00000615578 367 ntBASIC4.83□□□□□ -1.64
NID1P14543 MIR6837-201ENST00000620884 64 ntBASIC4.83□□□□□ -1.64
NID1P14543 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.83□□□□□ -1.64
NID1P14543 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NID1P14543 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
NID1P14543 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
NID1P14543 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NID1P14543 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NID1P14543 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NID1P14543 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NID1P14543 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
NID1P14543 AC007685.1-201ENST00000329806 452 ntBASIC4.82□□□□□ -1.64
NID1P14543 RNU6-989P-201ENST00000362756 107 ntBASIC4.82□□□□□ -1.64
NID1P14543 Y_RNA.343-201ENST00000365354 112 ntBASIC4.82□□□□□ -1.64
NID1P14543 Y_RNA.405-201ENST00000383979 100 ntBASIC4.82□□□□□ -1.64
NID1P14543 Y_RNA.451-201ENST00000384200 100 ntBASIC4.82□□□□□ -1.64
NID1P14543 Y_RNA.524-201ENST00000384564 100 ntBASIC4.82□□□□□ -1.64
NID1P14543 Y_RNA.561-201ENST00000384694 100 ntBASIC4.82□□□□□ -1.64
NID1P14543 MIR135A2-201ENST00000384854 100 ntBASIC4.82□□□□□ -1.64
NID1P14543 MIR223-201ENST00000385204 110 ntBASIC4.82□□□□□ -1.64
NID1P14543 RNU2-61P-201ENST00000411069 191 ntBASIC4.82□□□□□ -1.64
NID1P14543 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.82□□□□□ -1.64
NID1P14543 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.82□□□□□ -1.64
NID1P14543 CYCSP6-201ENST00000434498 302 ntBASIC4.82□□□□□ -1.64
NID1P14543 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.82□□□□□ -1.64
NID1P14543 RN7SL172P-201ENST00000460535 303 ntBASIC4.82□□□□□ -1.64
NID1P14543 RN7SL329P-201ENST00000467740 299 ntBASIC4.82□□□□□ -1.64
NID1P14543 RPS21P4-201ENST00000487122 248 ntBASIC4.82□□□□□ -1.64
NID1P14543 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.82□□□□□ -1.64
NID1P14543 RNU1-86P-201ENST00000516108 154 ntBASIC4.82□□□□□ -1.64
NID1P14543 RNU1-107P-201ENST00000516617 154 ntBASIC4.82□□□□□ -1.64
NID1P14543 RNU2-31P-201ENST00000516954 155 ntBASIC4.82□□□□□ -1.64
NID1P14543 RNU6-840P-201ENST00000517275 65 ntBASIC4.82□□□□□ -1.64
NID1P14543 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms