Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ITGA4P13612 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ITGA4P13612 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ITGA4P13612 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
ITGA4P13612 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.68□□□□□ -1.66
ITGA4P13612 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ITGA4P13612 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ITGA4P13612 RNU1-14P-201ENST00000362759 152 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ITGA4P13612 Y_RNA.399-201ENST00000383955 105 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RNU6-356P-201ENST00000384140 107 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AL445189.1-201ENST00000405722 338 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 SNORA74C-2-201ENST00000411179 201 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RNU6-954P-201ENST00000411355 107 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RPLP0P7-201ENST00000416050 667 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RPL31P12-201ENST00000422587 358 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.68□□□□□ -1.66
ITGA4P13612 AC073587.1-201ENST00000447093 876 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 ELOCP24-201ENST00000456370 334 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ITGA4P13612 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.68□□□□□ -1.66
ITGA4P13612 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
ITGA4P13612 MTCYBP40-201ENST00000509390 1135 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.68□□□□□ -1.66
ITGA4P13612 RNU2-69P-201ENST00000516061 100 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RNA5SP519-201ENST00000516480 119 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RNU6-352P-201ENST00000516908 107 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RNU6-677P-201ENST00000516914 101 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 RN7SKP60-201ENST00000516985 239 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.68□□□□□ -1.66
ITGA4P13612 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.68□□□□□ -1.66
ITGA4P13612 AC008489.1-201ENST00000524271 483 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AL352979.3-201ENST00000553515 247 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.68□□□□□ -1.66
ITGA4P13612 BNIP3P5-201ENST00000562290 498 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 MIR3941-201ENST00000582572 103 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 MIR5692C1-201ENST00000585309 91 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AC136443.5-201ENST00000603741 370 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 AC104763.2-201ENST00000604179 382 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 AL359547.2-201ENST00000615810 418 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
ITGA4P13612 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.68□□□□□ -1.66
ITGA4P13612 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ITGA4P13612 MTND5P19-201ENST00000424872 1794 ntBASIC4.68□□□□□ -1.66
ITGA4P13612 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ITGA4P13612 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ITGA4P13612 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.67□□□□□ -1.66
ITGA4P13612 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ITGA4P13612 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ITGA4P13612 RNU6-639P-201ENST00000384074 107 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 RNU6-434P-201ENST00000384376 107 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 SNORA57.1-201ENST00000391227 145 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AL583834.1-201ENST00000406943 343 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 RPL7AP73-201ENST00000413490 353 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.67□□□□□ -1.66
ITGA4P13612 AL669831.1-202ENST00000428504 417 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 MTND3P2-201ENST00000438452 342 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AL121871.1-201ENST00000443413 436 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.67□□□□□ -1.66
ITGA4P13612 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
ITGA4P13612 RPL21P103-201ENST00000479921 488 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AL592156.1-201ENST00000508758 304 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 SNORA14.1-201ENST00000516113 141 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 RNU6-1213P-201ENST00000517075 94 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 RNU6-840P-201ENST00000517275 65 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.67□□□□□ -1.66
ITGA4P13612 AC022634.1-201ENST00000520765 532 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ITGA4P13612 DNAJC8P1-201ENST00000554535 372 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.67□□□□□ -1.66
ITGA4P13612 AC174048.1-201ENST00000603389 144 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 FAM27D1-201ENST00000612308 341 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 SDR42E1P2-201ENST00000614861 481 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AC099669.2-201ENST00000616549 437 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ITGA4P13612 HSPA8P4-201ENST00000511877 1920 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ITGA4P13612 MTND5P10-201ENST00000603719 1809 ntBASIC4.67□□□□□ -1.66
ITGA4P13612 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ITGA4P13612 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ITGA4P13612 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
ITGA4P13612 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ITGA4P13612 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ITGA4P13612 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
ITGA4P13612 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.66□□□□□ -1.66
ITGA4P13612 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ITGA4P13612 RNU6-562P-201ENST00000362731 107 ntBASIC4.66□□□□□ -1.66
ITGA4P13612 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ITGA4P13612 Y_RNA.459-201ENST00000384251 102 ntBASIC4.66□□□□□ -1.66
ITGA4P13612 RNU6-14P-201ENST00000384630 106 ntBASIC4.66□□□□□ -1.66
ITGA4P13612 RNU6-882P-201ENST00000391025 103 ntBASIC4.66□□□□□ -1.66
ITGA4P13612 RNA5SP317-201ENST00000410176 116 ntBASIC4.66□□□□□ -1.66
ITGA4P13612 RNA5SP311-201ENST00000411290 116 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms