Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AL356321.1-201ENST00000621360 228 ntBASIC3.3□□□□□ -1.88
CDH1P12830 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH1P12830 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH1P12830 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH1P12830 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH1P12830 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CDH1P12830 AC004972.1-201ENST00000623934 2209 ntBASIC3.29□□□□□ -1.88
CDH1P12830 OR1S2-201ENST00000302592 978 ntBASIC3.29□□□□□ -1.88
CDH1P12830 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH1P12830 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH1P12830 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH1P12830 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
CDH1P12830 Y_RNA.409-201ENST00000383990 98 ntBASIC3.29□□□□□ -1.88
CDH1P12830 Y_RNA.450-201ENST00000384198 113 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AL590002.1-201ENST00000406554 418 ntBASIC3.29□□□□□ -1.88
CDH1P12830 HMGN1P24-201ENST00000412282 298 ntBASIC3.29□□□□□ -1.88
CDH1P12830 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH1P12830 BEND7P1-201ENST00000422058 457 ntBASIC3.29□□□□□ -1.88
CDH1P12830 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH1P12830 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH1P12830 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AL596276.1-201ENST00000434465 418 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH1P12830 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH1P12830 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH1P12830 RPL23AP22-201ENST00000437556 453 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC108059.3-201ENST00000456388 214 ntBASIC3.29□□□□□ -1.88
CDH1P12830 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH1P12830 RNU7-59P-201ENST00000459101 61 ntBASIC3.29□□□□□ -1.88
CDH1P12830 RPL23AP67-201ENST00000465341 474 ntBASIC3.29□□□□□ -1.88
CDH1P12830 MTCO3P38-201ENST00000468910 766 ntBASIC3.29□□□□□ -1.88
CDH1P12830 RPL7P23-201ENST00000493874 747 ntBASIC3.29□□□□□ -1.88
CDH1P12830 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
CDH1P12830 RNU6-1178P-201ENST00000516674 107 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC090572.1-201ENST00000519251 160 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
CDH1P12830 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
CDH1P12830 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH1P12830 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH1P12830 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH1P12830 MIR1254-2-201ENST00000579553 63 ntBASIC3.29□□□□□ -1.88
CDH1P12830 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CDH1P12830 AC006557.5-201ENST00000603126 811 ntBASIC3.29□□□□□ -1.88
CDH1P12830 XIAPP1-201ENST00000603162 600 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH1P12830 AC103710.2-201ENST00000609912 942 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC017083.3-201ENST00000609955 700 ntBASIC3.29□□□□□ -1.88
CDH1P12830 TUG1_1.1-201ENST00000610654 145 ntBASIC3.29□□□□□ -1.88
CDH1P12830 AC006338.1-201ENST00000618453 749 ntBASIC3.29□□□□□ -1.88
CDH1P12830 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH1P12830 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH1P12830 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 Y_RNA.9-201ENST00000362354 101 ntBASIC3.28□□□□□ -1.88
CDH1P12830 Y_RNA.256-201ENST00000364594 104 ntBASIC3.28□□□□□ -1.88
CDH1P12830 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.28□□□□□ -1.88
CDH1P12830 HSPE1P26-201ENST00000405341 275 ntBASIC3.28□□□□□ -1.88
CDH1P12830 RNU6-516P-201ENST00000411381 104 ntBASIC3.28□□□□□ -1.88
CDH1P12830 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
CDH1P12830 ELOCP4-201ENST00000420090 333 ntBASIC3.28□□□□□ -1.88
CDH1P12830 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH1P12830 DPPA2P1-201ENST00000428060 556 ntBASIC3.28□□□□□ -1.88
CDH1P12830 MTND2P24-201ENST00000453434 806 ntBASIC3.28□□□□□ -1.88
CDH1P12830 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 AC023194.1-201ENST00000493084 308 ntBASIC3.28□□□□□ -1.88
CDH1P12830 AC135721.1-201ENST00000497954 479 ntBASIC3.28□□□□□ -1.88
CDH1P12830 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
CDH1P12830 OR5AQ1P-201ENST00000527596 927 ntBASIC3.28□□□□□ -1.88
CDH1P12830 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH1P12830 OR5D17P-201ENST00000531492 978 ntBASIC3.28□□□□□ -1.88
CDH1P12830 AC007458.1-201ENST00000542812 373 ntBASIC3.28□□□□□ -1.88
CDH1P12830 SUB1P2-201ENST00000556401 297 ntBASIC3.28□□□□□ -1.88
CDH1P12830 HMGB1P33-201ENST00000563485 527 ntBASIC3.28□□□□□ -1.88
CDH1P12830 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
CDH1P12830 MIR3688-2-201ENST00000636963 87 ntBASIC3.28□□□□□ -1.88
CDH1P12830 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH1P12830 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH1P12830 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CDH1P12830 MTCO1P9-201ENST00000505577 1534 ntBASIC3.28□□□□□ -1.88
CDH1P12830 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH1P12830 RNA5SP50-201ENST00000363731 107 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH1P12830 RNU6-637P-201ENST00000384050 107 ntBASIC3.27□□□□□ -1.89
CDH1P12830 MIR490-201ENST00000384865 128 ntBASIC3.27□□□□□ -1.89
CDH1P12830 RNU6-754P-201ENST00000391166 107 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AL137014.1-201ENST00000420490 1226 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AL353193.1-201ENST00000421444 268 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AC244098.2-201ENST00000422068 99 ntBASIC3.27□□□□□ -1.89
CDH1P12830 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH1P12830 AC012498.1-201ENST00000424037 437 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AC137499.1-201ENST00000427602 88 ntBASIC3.27□□□□□ -1.89
CDH1P12830 MTND1P2-201ENST00000430604 821 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AC000111.3-201ENST00000433478 193 ntBASIC3.27□□□□□ -1.89
CDH1P12830 MTATP6P30-201ENST00000443540 664 ntBASIC3.27□□□□□ -1.89
CDH1P12830 AC008264.1-201ENST00000447612 367 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms