Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
HMGB1P09429 HSPE1P11-201ENST00000339579 310 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 RNU6-283P-201ENST00000364788 107 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 AC096649.2-201ENST00000416186 393 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 MTND2P18-201ENST00000419962 1030 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB1P09429 RPS15AP7-201ENST00000439294 405 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB1P09429 TAF9P1-201ENST00000445421 515 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB1P09429 TAF9P2-201ENST00000454958 515 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB1P09429 Y_RNA.689-201ENST00000516589 107 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.31□□□□□ -1.72
HMGB1P09429 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.31□□□□□ -1.72
HMGB1P09429 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB1P09429 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB1P09429 MIR3167-201ENST00000579623 85 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB1P09429 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.31□□□□□ -1.72
HMGB1P09429 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB1P09429 AL161734.1-201ENST00000609720 557 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 AC131902.3-201ENST00000611767 581 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 AC008250.2-201ENST00000615261 205 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HMGB1P09429 AC099654.13-201ENST00000639774 207 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB1P09429 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HMGB1P09429 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB1P09429 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB1P09429 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGB1P09429 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB1P09429 GNG5P1-201ENST00000255500 204 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGB1P09429 RNA5SP42-201ENST00000364278 115 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 SET-203ENST00000372688 801 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB1P09429 MIR301A-201ENST00000385261 86 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 RPL30P2-201ENST00000414021 291 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB1P09429 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HMGB1P09429 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB1P09429 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB1P09429 MTATP6P7-201ENST00000453315 681 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AL590639.1-201ENST00000456484 337 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 MTCO2P29-201ENST00000465212 189 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB1P09429 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB1P09429 AC021739.1-201ENST00000559631 174 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AC007151.1-201ENST00000572774 483 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AC090616.3-201ENST00000582184 217 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB1P09429 AL451007.1-201ENST00000595491 289 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB1P09429 AP002360.4-201ENST00000606980 481 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB1P09429 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 AC025048.6-202ENST00000627667 438 ntBASIC4.3□□□□□ -1.72
HMGB1P09429 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC004520.1-201ENST00000608362 1413 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB1P09429 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGB1P09429 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC073343.1-201ENST00000328239 651 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 RNU4-1-201ENST00000363925 141 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 RNY1P12-201ENST00000364251 105 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 SNORA68.1-201ENST00000364537 132 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 SNORA57.1-201ENST00000391227 145 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 AL049545.1-201ENST00000401856 572 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 RNU2-8P-201ENST00000410727 190 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 CYCSP46-201ENST00000423569 204 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 AC092447.3-201ENST00000426027 686 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 OR2AS1P-201ENST00000427827 319 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 AC097713.2-201ENST00000430199 356 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB1P09429 HMGN2P31-201ENST00000432430 273 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC007182.2-201ENST00000489251 402 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB1P09429 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB1P09429 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGB1P09429 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB1P09429 AC005261.5-201ENST00000596280 355 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 AL158032.1-201ENST00000605401 106 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 SNORD39.4-201ENST00000620099 78 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 PISRT1-201ENST00000626175 531 ntBASIC4.29□□□□□ -1.72
HMGB1P09429 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGB1P09429 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB1P09429 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
HMGB1P09429 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.28□□□□□ -1.72
HMGB1P09429 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HMGB1P09429 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB1P09429 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB1P09429 RNY4P34-201ENST00000364779 95 ntBASIC4.28□□□□□ -1.72
HMGB1P09429 RNU6-39P-201ENST00000384344 107 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms