Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.63□□□□□ -1.83
MMP3P08254 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.63□□□□□ -1.83
MMP3P08254 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MMP3P08254 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
MMP3P08254 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.62□□□□□ -1.83
MMP3P08254 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MMP3P08254 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 MTCO1P9-201ENST00000505577 1534 ntBASIC3.62□□□□□ -1.83
MMP3P08254 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MMP3P08254 OR4G2P-201ENST00000328113 903 ntBASIC3.62□□□□□ -1.83
MMP3P08254 RNU6-181P-201ENST00000363225 107 ntBASIC3.62□□□□□ -1.83
MMP3P08254 RNU6-629P-201ENST00000384061 103 ntBASIC3.62□□□□□ -1.83
MMP3P08254 SNORD115-47-201ENST00000391226 86 ntBASIC3.62□□□□□ -1.83
MMP3P08254 RNA5SP229-201ENST00000410809 99 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.62□□□□□ -1.83
MMP3P08254 MTND1P23-201ENST00000416931 372 ntBASIC3.62□□□□□ -1.83
MMP3P08254 TOMM22P1-201ENST00000418578 312 ntBASIC3.62□□□□□ -1.83
MMP3P08254 ELOCP4-201ENST00000420090 333 ntBASIC3.62□□□□□ -1.83
MMP3P08254 PIGFP2-201ENST00000421400 651 ntBASIC3.62□□□□□ -1.83
MMP3P08254 MTCYBP5-201ENST00000423752 1135 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.62□□□□□ -1.83
MMP3P08254 MTCO2P11-201ENST00000431069 680 ntBASIC3.62□□□□□ -1.83
MMP3P08254 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MMP3P08254 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.62□□□□□ -1.83
MMP3P08254 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MMP3P08254 AC234775.1-201ENST00000454247 670 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AC126182.1-201ENST00000478134 357 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AC004924.1-201ENST00000480160 781 ntBASIC3.62□□□□□ -1.83
MMP3P08254 RNU6-1095P-201ENST00000516148 108 ntBASIC3.62□□□□□ -1.83
MMP3P08254 MIR2114-201ENST00000516645 80 ntBASIC3.62□□□□□ -1.83
MMP3P08254 RNU6-445P-201ENST00000516949 107 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.62□□□□□ -1.83
MMP3P08254 AC022616.3-201ENST00000523940 148 ntBASIC3.62□□□□□ -1.83
MMP3P08254 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.62□□□□□ -1.83
MMP3P08254 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.62□□□□□ -1.83
MMP3P08254 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.62□□□□□ -1.83
MMP3P08254 AL845331.3-202ENST00000562856 261 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.62□□□□□ -1.83
MMP3P08254 MIR4738-201ENST00000579134 87 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.62□□□□□ -1.83
MMP3P08254 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 AC245517.5-201ENST00000611529 162 ntBASIC3.62□□□□□ -1.83
MMP3P08254 uc_338.1-201ENST00000612113 180 ntBASIC3.62□□□□□ -1.83
MMP3P08254 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MMP3P08254 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
MMP3P08254 ELF2P3-201ENST00000445099 1506 ntBASIC3.61□□□□□ -1.83
MMP3P08254 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MMP3P08254 OR1S2-201ENST00000302592 978 ntBASIC3.61□□□□□ -1.83
MMP3P08254 RNU4-12P-201ENST00000365233 139 ntBASIC3.61□□□□□ -1.83
MMP3P08254 Y_RNA.381-201ENST00000365666 102 ntBASIC3.61□□□□□ -1.83
MMP3P08254 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
MMP3P08254 AL138885.1-201ENST00000405921 675 ntBASIC3.61□□□□□ -1.83
MMP3P08254 MIR1289-1-201ENST00000408836 144 ntBASIC3.61□□□□□ -1.83
MMP3P08254 RNU6-516P-201ENST00000411381 104 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AL137014.1-201ENST00000420490 1226 ntBASIC3.61□□□□□ -1.83
MMP3P08254 EIF1P1-201ENST00000421436 341 ntBASIC3.61□□□□□ -1.83
MMP3P08254 RPL23AP30-201ENST00000432419 501 ntBASIC3.61□□□□□ -1.83
MMP3P08254 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.61□□□□□ -1.83
MMP3P08254 UBE2V1P8-201ENST00000437166 265 ntBASIC3.61□□□□□ -1.83
MMP3P08254 NPM1P49-201ENST00000448027 714 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.61□□□□□ -1.83
MMP3P08254 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.61□□□□□ -1.83
MMP3P08254 MTND1P12-201ENST00000455231 147 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AL121769.1-201ENST00000469473 401 ntBASIC3.61□□□□□ -1.83
MMP3P08254 RPL7P47-201ENST00000497299 556 ntBASIC3.61□□□□□ -1.83
MMP3P08254 ARL2BPP6-201ENST00000512757 439 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.61□□□□□ -1.83
MMP3P08254 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.61□□□□□ -1.83
MMP3P08254 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.61□□□□□ -1.83
MMP3P08254 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.61□□□□□ -1.83
MMP3P08254 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.61□□□□□ -1.83
MMP3P08254 AC125611.2-201ENST00000551907 647 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.61□□□□□ -1.83
MMP3P08254 AC087481.2-201ENST00000565492 330 ntBASIC3.61□□□□□ -1.83
MMP3P08254 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.61□□□□□ -1.83
MMP3P08254 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.61□□□□□ -1.83
MMP3P08254 AC007687.1-201ENST00000602704 304 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AL391646.1-201ENST00000603860 190 ntBASIC3.61□□□□□ -1.83
MMP3P08254 TUG1_1.1-201ENST00000610654 145 ntBASIC3.61□□□□□ -1.83
MMP3P08254 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
MMP3P08254 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.61□□□□□ -1.83
MMP3P08254 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MMP3P08254 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MMP3P08254 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MMP3P08254 RNU6-1155P-201ENST00000363554 107 ntBASIC3.6□□□□□ -1.83
MMP3P08254 MTCO3P40-201ENST00000392516 676 ntBASIC3.6□□□□□ -1.83
MMP3P08254 BTF3P7-201ENST00000407097 488 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms