Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHOP08100 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RHOP08100 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.93□□□□□ -1.78
RHOP08100 AC006026.1-201ENST00000444025 1803 ntBASIC3.93□□□□□ -1.78
RHOP08100 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RHOP08100 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHOP08100 RNA5SP52-201ENST00000362448 134 ntBASIC3.93□□□□□ -1.78
RHOP08100 RNA5SP502-201ENST00000362694 119 ntBASIC3.93□□□□□ -1.78
RHOP08100 Y_RNA.231-201ENST00000364358 102 ntBASIC3.93□□□□□ -1.78
RHOP08100 SNORA51.2-201ENST00000364595 132 ntBASIC3.93□□□□□ -1.78
RHOP08100 RNU6-637P-201ENST00000384050 107 ntBASIC3.93□□□□□ -1.78
RHOP08100 RNU6-432P-201ENST00000384196 109 ntBASIC3.93□□□□□ -1.78
RHOP08100 MIR218-2-201ENST00000385006 110 ntBASIC3.93□□□□□ -1.78
RHOP08100 MIR93-201ENST00000385024 80 ntBASIC3.93□□□□□ -1.78
RHOP08100 RNU2-47P-201ENST00000410649 186 ntBASIC3.93□□□□□ -1.78
RHOP08100 MTCYBP8-201ENST00000422855 651 ntBASIC3.93□□□□□ -1.78
RHOP08100 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
RHOP08100 AL365400.1-201ENST00000431854 640 ntBASIC3.93□□□□□ -1.78
RHOP08100 RPL7P12-201ENST00000446719 750 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.93□□□□□ -1.78
RHOP08100 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.93□□□□□ -1.78
RHOP08100 RNU7-182P-201ENST00000459009 62 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC135721.1-201ENST00000497954 479 ntBASIC3.93□□□□□ -1.78
RHOP08100 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.93□□□□□ -1.78
RHOP08100 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RHOP08100 AC074250.1-201ENST00000511117 192 ntBASIC3.93□□□□□ -1.78
RHOP08100 RNU4-29P-201ENST00000515943 174 ntBASIC3.93□□□□□ -1.78
RHOP08100 Vault.1-201ENST00000516474 102 ntBASIC3.93□□□□□ -1.78
RHOP08100 HMGB1P41-201ENST00000520234 440 ntBASIC3.93□□□□□ -1.78
RHOP08100 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.93□□□□□ -1.78
RHOP08100 OR5B10P-201ENST00000532869 642 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC087241.2-201ENST00000535801 324 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC125611.2-201ENST00000551907 647 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.93□□□□□ -1.78
RHOP08100 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.93□□□□□ -1.78
RHOP08100 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.93□□□□□ -1.78
RHOP08100 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.93□□□□□ -1.78
RHOP08100 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.93□□□□□ -1.78
RHOP08100 SNORA62.6-201ENST00000606322 83 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.93□□□□□ -1.78
RHOP08100 uc_338.5-201ENST00000611839 155 ntBASIC3.93□□□□□ -1.78
RHOP08100 uc_338.11-201ENST00000619132 160 ntBASIC3.93□□□□□ -1.78
RHOP08100 AC090617.10-201ENST00000624308 134 ntBASIC3.93□□□□□ -1.78
RHOP08100 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHOP08100 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHOP08100 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHOP08100 ASNSP3-201ENST00000451989 1306 ntBASIC3.93□□□□□ -1.78
RHOP08100 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.92□□□□□ -1.78
RHOP08100 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHOP08100 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHOP08100 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RHOP08100 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RHOP08100 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHOP08100 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHOP08100 AC073343.1-201ENST00000328239 651 ntBASIC3.92□□□□□ -1.78
RHOP08100 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RHOP08100 RNU6-525P-201ENST00000363685 104 ntBASIC3.92□□□□□ -1.78
RHOP08100 RNU5E-6P-201ENST00000365574 115 ntBASIC3.92□□□□□ -1.78
RHOP08100 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHOP08100 RNU6-116P-201ENST00000384042 109 ntBASIC3.92□□□□□ -1.78
RHOP08100 RNU6-332P-201ENST00000391193 108 ntBASIC3.92□□□□□ -1.78
RHOP08100 PTMAP5-201ENST00000393073 333 ntBASIC3.92□□□□□ -1.78
RHOP08100 SOD2P1-201ENST00000396543 562 ntBASIC3.92□□□□□ -1.78
RHOP08100 RNA5SP107-201ENST00000411358 122 ntBASIC3.92□□□□□ -1.78
RHOP08100 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.92□□□□□ -1.78
RHOP08100 RPL35AP12-201ENST00000425362 338 ntBASIC3.92□□□□□ -1.78
RHOP08100 FTH1P6-201ENST00000430768 320 ntBASIC3.92□□□□□ -1.78
RHOP08100 AL159987.2-201ENST00000432754 307 ntBASIC3.92□□□□□ -1.78
RHOP08100 USP9YP7-201ENST00000436723 430 ntBASIC3.92□□□□□ -1.78
RHOP08100 AL353748.1-201ENST00000440753 474 ntBASIC3.92□□□□□ -1.78
RHOP08100 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
RHOP08100 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.92□□□□□ -1.78
RHOP08100 USP9YP32-201ENST00000452432 430 ntBASIC3.92□□□□□ -1.78
RHOP08100 AC007967.1-201ENST00000455422 1159 ntBASIC3.92□□□□□ -1.78
RHOP08100 RPL23AP11-201ENST00000475260 469 ntBASIC3.92□□□□□ -1.78
RHOP08100 RPS27AP1-201ENST00000475545 471 ntBASIC3.92□□□□□ -1.78
RHOP08100 RPL7P23-201ENST00000493874 747 ntBASIC3.92□□□□□ -1.78
RHOP08100 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.92□□□□□ -1.78
RHOP08100 AC025445.1-201ENST00000502728 300 ntBASIC3.92□□□□□ -1.78
RHOP08100 MTCO3P9-201ENST00000506989 781 ntBASIC3.92□□□□□ -1.78
RHOP08100 RAC1P2-201ENST00000511164 579 ntBASIC3.92□□□□□ -1.78
RHOP08100 RNU6-1314P-201ENST00000517139 104 ntBASIC3.92□□□□□ -1.78
RHOP08100 AC105029.1-201ENST00000520250 669 ntBASIC3.92□□□□□ -1.78
RHOP08100 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.92□□□□□ -1.78
RHOP08100 SUMO2P20-201ENST00000520803 283 ntBASIC3.92□□□□□ -1.78
RHOP08100 PSMA2P1-201ENST00000526365 646 ntBASIC3.92□□□□□ -1.78
RHOP08100 DEFB108D-201ENST00000527787 222 ntBASIC3.92□□□□□ -1.78
RHOP08100 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.92□□□□□ -1.78
RHOP08100 AC069240.1-201ENST00000548774 375 ntBASIC3.92□□□□□ -1.78
RHOP08100 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.92□□□□□ -1.78
RHOP08100 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RHOP08100 AP001029.3-201ENST00000588063 596 ntBASIC3.92□□□□□ -1.78
RHOP08100 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.92□□□□□ -1.78
RHOP08100 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.92□□□□□ -1.78
RHOP08100 AL031176.1-201ENST00000604554 466 ntBASIC3.92□□□□□ -1.78
RHOP08100 AC021646.1-201ENST00000605469 484 ntBASIC3.92□□□□□ -1.78
RHOP08100 MIR7975-201ENST00000619350 68 ntBASIC3.92□□□□□ -1.78
RHOP08100 MIR6130-201ENST00000619419 109 ntBASIC3.92□□□□□ -1.78
RHOP08100 AC009248.2-201ENST00000619826 254 ntBASIC3.92□□□□□ -1.78
RHOP08100 AC079684.1-201ENST00000621405 437 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms