Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3□□□□□ -1.93
PDGFBP01127 USP9YP26-201ENST00000421008 661 ntBASIC3□□□□□ -1.93
PDGFBP01127 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3□□□□□ -1.93
PDGFBP01127 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3□□□□□ -1.93
PDGFBP01127 AC129850.1-201ENST00000436203 508 ntBASIC3□□□□□ -1.93
PDGFBP01127 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3□□□□□ -1.93
PDGFBP01127 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
PDGFBP01127 MTCYBP3-201ENST00000445588 1137 ntBASIC3□□□□□ -1.93
PDGFBP01127 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3□□□□□ -1.93
PDGFBP01127 MTND4LP3-201ENST00000468320 276 ntBASIC3□□□□□ -1.93
PDGFBP01127 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
PDGFBP01127 MRPS33P3-201ENST00000513456 322 ntBASIC3□□□□□ -1.93
PDGFBP01127 RNU6-1129P-201ENST00000515964 104 ntBASIC3□□□□□ -1.93
PDGFBP01127 RNA5SP24-201ENST00000516478 95 ntBASIC3□□□□□ -1.93
PDGFBP01127 RNU6-1256P-201ENST00000516539 103 ntBASIC3□□□□□ -1.93
PDGFBP01127 MIR2276-201ENST00000516886 89 ntBASIC3□□□□□ -1.93
PDGFBP01127 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3□□□□□ -1.93
PDGFBP01127 AP000873.5-201ENST00000533906 236 ntBASIC3□□□□□ -1.93
PDGFBP01127 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3□□□□□ -1.93
PDGFBP01127 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
PDGFBP01127 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3□□□□□ -1.93
PDGFBP01127 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3□□□□□ -1.93
PDGFBP01127 ISCA1P3-201ENST00000577104 373 ntBASIC3□□□□□ -1.93
PDGFBP01127 SNORD53-201ENST00000579969 78 ntBASIC3□□□□□ -1.93
PDGFBP01127 AC018714.1-201ENST00000605028 208 ntBASIC3□□□□□ -1.93
PDGFBP01127 AL136363.1-201ENST00000605349 337 ntBASIC3□□□□□ -1.93
PDGFBP01127 AC018638.7-201ENST00000605836 1114 ntBASIC3□□□□□ -1.93
PDGFBP01127 AC090186.1-201ENST00000605991 572 ntBASIC3□□□□□ -1.93
PDGFBP01127 AC091903.1-201ENST00000624322 454 ntBASIC3□□□□□ -1.93
PDGFBP01127 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PDGFBP01127 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
PDGFBP01127 OR4G2P-202ENST00000641004 1759 ntBASIC3□□□□□ -1.93
PDGFBP01127 AC007785.2-201ENST00000598627 1916 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFBP01127 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFBP01127 RNU1-105P-201ENST00000363470 161 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 RNU5E-8P-201ENST00000363502 116 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 RNU5F-7P-201ENST00000363696 115 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.99□□□□□ -1.93
PDGFBP01127 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.99□□□□□ -1.93
PDGFBP01127 RNU6-741P-201ENST00000383889 107 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 Z85995.1-201ENST00000415547 335 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 BX276092.3-201ENST00000424182 230 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.99□□□□□ -1.93
PDGFBP01127 SRIP2-201ENST00000428470 166 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 UBE2V1P13-201ENST00000436983 439 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 MTCYBP39-201ENST00000437562 491 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AL606662.1-201ENST00000445763 553 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFBP01127 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.99□□□□□ -1.93
PDGFBP01127 MTCO1P27-201ENST00000448269 226 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFBP01127 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.99□□□□□ -1.93
PDGFBP01127 AP001025.2-201ENST00000490908 477 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFBP01127 AF131216.2-201ENST00000512316 564 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFBP01127 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.99□□□□□ -1.93
PDGFBP01127 RNU6-678P-201ENST00000516832 109 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 RNA5SP291-201ENST00000517222 105 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFBP01127 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PDGFBP01127 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFBP01127 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFBP01127 AC024153.1-201ENST00000603103 365 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC072039.2-201ENST00000608883 439 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC009159.1-201ENST00000618386 642 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC090617.7-201ENST00000623952 126 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC007494.3-201ENST00000624660 743 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC019226.2-201ENST00000625973 424 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.99□□□□□ -1.93
PDGFBP01127 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFBP01127 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFBP01127 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.99□□□□□ -1.93
PDGFBP01127 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 API5P2-201ENST00000397055 1498 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 ZNF519P1-201ENST00000449011 1626 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AL391994.1-201ENST00000254724 282 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFBP01127 RNU6-462P-201ENST00000362659 105 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFBP01127 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
PDGFBP01127 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 HMGN2P30-201ENST00000423237 256 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFBP01127 RPS20P5-201ENST00000434808 360 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFBP01127 RPL35AP22-201ENST00000436855 335 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 ARPC3P1-201ENST00000437218 533 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFBP01127 AC112653.1-201ENST00000443851 386 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFBP01127 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFBP01127 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFBP01127 ZNF114P1-201ENST00000453500 292 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 snoU13.15-201ENST00000459407 104 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 BZW1P2-201ENST00000473537 826 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms