Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ABCA1O95477 EIF4EP5-201ENST00000528228 640 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ABCA1O95477 AC027309.3-201ENST00000623419 351 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ABCA1O95477 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ABCA1O95477 U8.1-201ENST00000362843 134 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 SUMO1P4-201ENST00000429430 302 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
ABCA1O95477 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 RN7SL274P-201ENST00000492268 272 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 AP002748.2-201ENST00000528671 348 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.23□□□□□ -2.21
ABCA1O95477 DPRXP5-201ENST00000604662 539 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.23□□□□□ -2.21
ABCA1O95477 CENPCP1-201ENST00000533085 2578 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ABCA1O95477 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ABCA1O95477 RNU4-51P-201ENST00000364206 140 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 MIR17-201ENST00000385012 84 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.22□□□□□ -2.21
ABCA1O95477 TRIM60P13-201ENST00000432350 1283 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 RNU5F-8P-201ENST00000515941 111 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 RPPH1-2P-201ENST00000516688 293 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.22□□□□□ -2.21
ABCA1O95477 ANP32BP3-201ENST00000559213 706 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 OR4K8P-201ENST00000578842 1048 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 AC006338.1-201ENST00000618453 749 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.22□□□□□ -2.21
ABCA1O95477 MIR203B-201ENST00000636080 86 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.22□□□□□ -2.21
ABCA1O95477 MTND5P10-201ENST00000603719 1809 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 RNU6-670P-201ENST00000364312 104 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 RNU6-997P-201ENST00000384725 107 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.22□□□□□ -2.21
ABCA1O95477 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC025768.1-201ENST00000510057 267 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC023813.2-201ENST00000564321 469 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 AC006329.2-201ENST00000611491 394 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 MIR6840-201ENST00000611937 71 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.22□□□□□ -2.21
ABCA1O95477 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
ABCA1O95477 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.22□□□□□ -2.21
ABCA1O95477 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
ABCA1O95477 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCA1O95477 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
ABCA1O95477 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ABCA1O95477 SNORD48-201ENST00000364953 64 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 RNA5SP354-201ENST00000391247 136 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCA1O95477 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCA1O95477 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.21□□□□□ -2.22
ABCA1O95477 ARL5AP3-201ENST00000439327 386 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 AC078857.1-201ENST00000469870 667 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 AC034222.1-201ENST00000494052 532 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCA1O95477 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCA1O95477 HMGB3P3-201ENST00000510526 400 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ABCA1O95477 TRAV28-201ENST00000557548 323 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCA1O95477 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.21□□□□□ -2.22
ABCA1O95477 AC090666.1-201ENST00000578241 445 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.21□□□□□ -2.22
ABCA1O95477 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ABCA1O95477 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ABCA1O95477 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ABCA1O95477 AL513185.3-201ENST00000433335 1300 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 AC008568.2-201ENST00000623862 2313 ntBASIC1.21□□□□□ -2.22
ABCA1O95477 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ABCA1O95477 RNU6-1249P-201ENST00000363237 111 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 RNA5SP27-201ENST00000363839 119 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 RNU6-730P-201ENST00000383954 104 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 SNORA6-201ENST00000384033 151 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 RNU6-1032P-201ENST00000384100 107 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 POLHP1-201ENST00000411806 470 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.2□□□□□ -2.22
ABCA1O95477 RPL36P19-201ENST00000430744 301 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.2□□□□□ -2.22
ABCA1O95477 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.2□□□□□ -2.22
ABCA1O95477 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms