Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.49□□□□□ -2.33
USH2AO75445 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
USH2AO75445 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
USH2AO75445 VTRNA1-1-201ENST00000363120 99 ntBASIC0.49□□□□□ -2.33
USH2AO75445 MIR329-2-201ENST00000385029 84 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC013470.3-201ENST00000420252 1194 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC016691.1-201ENST00000441321 413 ntBASIC0.49□□□□□ -2.33
USH2AO75445 RPS26P21-201ENST00000475397 348 ntBASIC0.49□□□□□ -2.33
USH2AO75445 RPL23AP41-201ENST00000484754 458 ntBASIC0.49□□□□□ -2.33
USH2AO75445 MTND5P4-201ENST00000514978 288 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.49□□□□□ -2.33
USH2AO75445 OR4K8P-201ENST00000578842 1048 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AL590099.1-201ENST00000615276 138 ntBASIC0.49□□□□□ -2.33
USH2AO75445 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USH2AO75445 PABPC1P7-201ENST00000413177 1513 ntBASIC0.49□□□□□ -2.33
USH2AO75445 Y_RNA.413-201ENST00000384007 102 ntBASIC0.49□□□□□ -2.33
USH2AO75445 OR51A5P-201ENST00000415429 942 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.49□□□□□ -2.33
USH2AO75445 OR51B8P-201ENST00000449892 769 ntBASIC0.49□□□□□ -2.33
USH2AO75445 Y_RNA.754-201ENST00000476024 102 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC023050.2-201ENST00000544968 387 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC025918.2-201ENST00000558683 763 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AC068620.3-201ENST00000602749 560 ntBASIC0.49□□□□□ -2.33
USH2AO75445 uc_338.14-201ENST00000613162 166 ntBASIC0.49□□□□□ -2.33
USH2AO75445 Y_RNA.790-201ENST00000614282 102 ntBASIC0.49□□□□□ -2.33
USH2AO75445 Y_RNA.782-201ENST00000614695 102 ntBASIC0.49□□□□□ -2.33
USH2AO75445 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
USH2AO75445 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.49□□□□□ -2.33
USH2AO75445 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USH2AO75445 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.49□□□□□ -2.33
USH2AO75445 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.49□□□□□ -2.33
USH2AO75445 HMGB1P49-201ENST00000418882 569 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.49□□□□□ -2.33
USH2AO75445 AC005912.1-201ENST00000495392 255 ntBASIC0.49□□□□□ -2.33
USH2AO75445 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
USH2AO75445 MTND5P21-201ENST00000531961 522 ntBASIC0.49□□□□□ -2.33
USH2AO75445 SNRPGP17-201ENST00000603780 214 ntBASIC0.49□□□□□ -2.33
USH2AO75445 RPL21P136-201ENST00000605378 396 ntBASIC0.49□□□□□ -2.33
USH2AO75445 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USH2AO75445 AL118496.1-201ENST00000440201 1812 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
USH2AO75445 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.48□□□□□ -2.33
USH2AO75445 AP000926.1-201ENST00000479573 241 ntBASIC0.48□□□□□ -2.33
USH2AO75445 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.48□□□□□ -2.33
USH2AO75445 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.48□□□□□ -2.33
USH2AO75445 OR8X1P-201ENST00000534542 869 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.48□□□□□ -2.33
USH2AO75445 AC048347.1-201ENST00000624621 427 ntBASIC0.48□□□□□ -2.33
USH2AO75445 RNU6-203P-201ENST00000384038 104 ntBASIC0.48□□□□□ -2.33
USH2AO75445 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
USH2AO75445 SNORA79B-201ENST00000410557 148 ntBASIC0.48□□□□□ -2.33
USH2AO75445 NUP35P2-201ENST00000416748 943 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.48□□□□□ -2.33
USH2AO75445 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.48□□□□□ -2.33
USH2AO75445 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.48□□□□□ -2.33
USH2AO75445 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.48□□□□□ -2.33
USH2AO75445 RNA5SP233-201ENST00000459153 113 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.48□□□□□ -2.33
USH2AO75445 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.48□□□□□ -2.33
USH2AO75445 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.48□□□□□ -2.33
USH2AO75445 AC108676.2-201ENST00000605225 163 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.48□□□□□ -2.33
USH2AO75445 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
USH2AO75445 MIR365B-201ENST00000362317 111 ntBASIC0.48□□□□□ -2.33
USH2AO75445 MIR1207-201ENST00000408249 87 ntBASIC0.48□□□□□ -2.33
USH2AO75445 RNU2-22P-201ENST00000411266 212 ntBASIC0.48□□□□□ -2.33
USH2AO75445 OR6C66P-201ENST00000414917 930 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
USH2AO75445 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC0.48□□□□□ -2.33
USH2AO75445 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.48□□□□□ -2.33
USH2AO75445 SNORA31.15-201ENST00000516771 132 ntBASIC0.48□□□□□ -2.33
USH2AO75445 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.48□□□□□ -2.33
USH2AO75445 AC233266.2-201ENST00000567067 528 ntBASIC0.48□□□□□ -2.33
USH2AO75445 HAUS6P2-201ENST00000433254 2404 ntBASIC0.48□□□□□ -2.33
USH2AO75445 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.48□□□□□ -2.33
USH2AO75445 MIR524-201ENST00000385242 87 ntBASIC0.48□□□□□ -2.33
USH2AO75445 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
USH2AO75445 RPS27P1-201ENST00000450552 247 ntBASIC0.48□□□□□ -2.33
USH2AO75445 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.48□□□□□ -2.33
USH2AO75445 RNA5SP309-201ENST00000516670 106 ntBASIC0.48□□□□□ -2.33
USH2AO75445 SNORA31.16-201ENST00000516773 139 ntBASIC0.48□□□□□ -2.33
USH2AO75445 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USH2AO75445 RNU6-17P-201ENST00000384245 107 ntBASIC0.47□□□□□ -2.33
USH2AO75445 RNU6-18P-201ENST00000384527 107 ntBASIC0.47□□□□□ -2.33
USH2AO75445 RNU6-603P-201ENST00000411403 107 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.47□□□□□ -2.33
USH2AO75445 RPS20P10-201ENST00000451209 253 ntBASIC0.47□□□□□ -2.33
USH2AO75445 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.47□□□□□ -2.33
USH2AO75445 RPL9P9-202ENST00000466501 579 ntBASIC0.47□□□□□ -2.33
USH2AO75445 SNORA31.26-201ENST00000517250 137 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AC025755.1-201ENST00000521306 278 ntBASIC0.47□□□□□ -2.33
USH2AO75445 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USH2AO75445 RNA5SP511-201ENST00000410487 115 ntBASIC0.47□□□□□ -2.33
USH2AO75445 RPL7P53-201ENST00000421245 739 ntBASIC0.47□□□□□ -2.33
USH2AO75445 RPL30P4-201ENST00000429309 333 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.47□□□□□ -2.33
USH2AO75445 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.47□□□□□ -2.33
USH2AO75445 SNRPGP3-201ENST00000469405 227 ntBASIC0.47□□□□□ -2.33
USH2AO75445 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.47□□□□□ -2.33
USH2AO75445 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms