Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF40O75150 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF40O75150 AL031595.2-201ENST00000624215 19071 ntBASIC5.94□□□□□ -1.46
RNF40O75150 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF40O75150 AC020633.1-201ENST00000468439 2247 ntBASIC5.94□□□□□ -1.46
RNF40O75150 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF40O75150 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF40O75150 SRRM1P3-201ENST00000426911 2678 ntBASIC5.93□□□□□ -1.46
RNF40O75150 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF40O75150 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF40O75150 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF40O75150 RNU6-834P-201ENST00000362367 110 ntBASIC5.93□□□□□ -1.46
RNF40O75150 SNORA40-201ENST00000388090 126 ntBASIC5.93□□□□□ -1.46
RNF40O75150 RNA5SP213-201ENST00000391031 106 ntBASIC5.93□□□□□ -1.46
RNF40O75150 RPS4XP3-201ENST00000398541 413 ntBASIC5.93□□□□□ -1.46
RNF40O75150 SPTLC1P2-201ENST00000407089 121 ntBASIC5.93□□□□□ -1.46
RNF40O75150 RNU4-34P-201ENST00000410431 124 ntBASIC5.93□□□□□ -1.46
RNF40O75150 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF40O75150 SSXP9-201ENST00000417503 292 ntBASIC5.93□□□□□ -1.46
RNF40O75150 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF40O75150 NUTF2P7-201ENST00000453086 375 ntBASIC5.93□□□□□ -1.46
RNF40O75150 SNORD125-201ENST00000459538 96 ntBASIC5.93□□□□□ -1.46
RNF40O75150 COPS8P2-201ENST00000473228 627 ntBASIC5.93□□□□□ -1.46
RNF40O75150 RPS15AP34-201ENST00000487776 387 ntBASIC5.93□□□□□ -1.46
RNF40O75150 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF40O75150 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF40O75150 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF40O75150 snoU109.6-201ENST00000516831 118 ntBASIC5.93□□□□□ -1.46
RNF40O75150 RNU7-110P-201ENST00000516891 62 ntBASIC5.93□□□□□ -1.46
RNF40O75150 RNA5SP170-201ENST00000517150 101 ntBASIC5.93□□□□□ -1.46
RNF40O75150 ATP5F1P5-201ENST00000526403 760 ntBASIC5.93□□□□□ -1.46
RNF40O75150 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF40O75150 AC044860.2-201ENST00000561005 179 ntBASIC5.93□□□□□ -1.46
RNF40O75150 AL355812.1-201ENST00000603215 216 ntBASIC5.93□□□□□ -1.46
RNF40O75150 IMMP1LP3-201ENST00000604197 224 ntBASIC5.93□□□□□ -1.46
RNF40O75150 AL139124.1-201ENST00000609123 421 ntBASIC5.93□□□□□ -1.46
RNF40O75150 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF40O75150 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF40O75150 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF40O75150 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF40O75150 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RNF40O75150 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF40O75150 AC083899.1-201ENST00000454465 3819 ntBASIC5.93□□□□□ -1.46
RNF40O75150 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF40O75150 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF40O75150 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF40O75150 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 SMG1P7-201ENST00000565246 2704 ntBASIC5.92□□□□□ -1.46
RNF40O75150 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF40O75150 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RNF40O75150 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF40O75150 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF40O75150 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 RNU6-227P-201ENST00000362865 103 ntBASIC5.92□□□□□ -1.46
RNF40O75150 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RNF40O75150 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.92□□□□□ -1.46
RNF40O75150 MTND4LP9-201ENST00000427694 174 ntBASIC5.92□□□□□ -1.46
RNF40O75150 AP000907.1-201ENST00000428428 510 ntBASIC5.92□□□□□ -1.46
RNF40O75150 AL358472.1-201ENST00000431295 329 ntBASIC5.92□□□□□ -1.46
RNF40O75150 NDUFB4P8-201ENST00000435351 367 ntBASIC5.92□□□□□ -1.46
RNF40O75150 MRPS10P1-201ENST00000448483 130 ntBASIC5.92□□□□□ -1.46
RNF40O75150 AC090804.1-201ENST00000448870 490 ntBASIC5.92□□□□□ -1.46
RNF40O75150 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 AC023424.1-201ENST00000496058 459 ntBASIC5.92□□□□□ -1.46
RNF40O75150 AC093840.1-201ENST00000511599 336 ntBASIC5.92□□□□□ -1.46
RNF40O75150 SNORA31.22-201ENST00000517204 135 ntBASIC5.92□□□□□ -1.46
RNF40O75150 AC137627.1-201ENST00000545761 289 ntBASIC5.92□□□□□ -1.46
RNF40O75150 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF40O75150 AC010928.2-201ENST00000588017 287 ntBASIC5.92□□□□□ -1.46
RNF40O75150 RPL23AP88-201ENST00000605759 454 ntBASIC5.92□□□□□ -1.46
RNF40O75150 AC005520.5-201ENST00000613926 164 ntBASIC5.92□□□□□ -1.46
RNF40O75150 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RNF40O75150 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF40O75150 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF40O75150 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF40O75150 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF40O75150 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF40O75150 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF40O75150 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
RNF40O75150 AC007842.1-201ENST00000597336 2039 ntBASIC5.91□□□□□ -1.46
RNF40O75150 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF40O75150 Y_RNA.123-201ENST00000363338 102 ntBASIC5.91□□□□□ -1.46
RNF40O75150 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF40O75150 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RNF40O75150 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 Y_RNA.412-201ENST00000384001 104 ntBASIC5.91□□□□□ -1.46
RNF40O75150 AL133173.1-201ENST00000423458 397 ntBASIC5.91□□□□□ -1.46
RNF40O75150 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.91□□□□□ -1.46
RNF40O75150 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms