Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX3O60493 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SNX3O60493 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX3O60493 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNX3O60493 RPL9P7-201ENST00000330965 580 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC073325.2-201ENST00000339545 159 ntBASIC2.98□□□□□ -1.93
SNX3O60493 U8.3-201ENST00000363321 132 ntBASIC2.98□□□□□ -1.93
SNX3O60493 RNU6-511P-201ENST00000363496 107 ntBASIC2.98□□□□□ -1.93
SNX3O60493 RNY4P34-201ENST00000364779 95 ntBASIC2.98□□□□□ -1.93
SNX3O60493 Y_RNA.553-201ENST00000384670 102 ntBASIC2.98□□□□□ -1.93
SNX3O60493 SNORA1.3-201ENST00000384676 136 ntBASIC2.98□□□□□ -1.93
SNX3O60493 RPL21P17-201ENST00000397467 475 ntBASIC2.98□□□□□ -1.93
SNX3O60493 RNU2-36P-201ENST00000410361 191 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC006366.1-201ENST00000422002 759 ntBASIC2.98□□□□□ -1.93
SNX3O60493 USP9YP36-201ENST00000424581 829 ntBASIC2.98□□□□□ -1.93
SNX3O60493 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC004975.1-201ENST00000428733 208 ntBASIC2.98□□□□□ -1.93
SNX3O60493 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX3O60493 RPL21P2-201ENST00000440049 481 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AL031667.1-201ENST00000440222 725 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC093156.1-201ENST00000440382 670 ntBASIC2.98□□□□□ -1.93
SNX3O60493 MTCO1P19-201ENST00000443487 500 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AL590664.1-201ENST00000448065 339 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX3O60493 AL122001.1-201ENST00000457027 370 ntBASIC2.98□□□□□ -1.93
SNX3O60493 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX3O60493 RNU6-956P-201ENST00000458868 103 ntBASIC2.98□□□□□ -1.93
SNX3O60493 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.98□□□□□ -1.93
SNX3O60493 AL135752.1-201ENST00000479477 471 ntBASIC2.98□□□□□ -1.93
SNX3O60493 RPL30P14-201ENST00000482744 348 ntBASIC2.98□□□□□ -1.93
SNX3O60493 RN7SL297P-201ENST00000483161 293 ntBASIC2.98□□□□□ -1.93
SNX3O60493 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX3O60493 AC010424.1-201ENST00000506336 297 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.98□□□□□ -1.93
SNX3O60493 NDUFB4P2-201ENST00000509515 391 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC006445.2-201ENST00000510061 472 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX3O60493 TRMT10BP1-201ENST00000519377 943 ntBASIC2.98□□□□□ -1.93
SNX3O60493 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX3O60493 AP002453.2-201ENST00000533503 320 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.98□□□□□ -1.93
SNX3O60493 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX3O60493 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
SNX3O60493 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX3O60493 RSL24D1P11-201ENST00000591045 491 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AC087752.4-201ENST00000605911 462 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AL451064.1-201ENST00000607718 471 ntBASIC2.98□□□□□ -1.93
SNX3O60493 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.98□□□□□ -1.93
SNX3O60493 AP001506.1-201ENST00000615444 211 ntBASIC2.98□□□□□ -1.93
SNX3O60493 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX3O60493 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX3O60493 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 RN7SKP280-201ENST00000364196 304 ntBASIC2.97□□□□□ -1.93
SNX3O60493 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNX3O60493 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SNX3O60493 RPL23AP32-201ENST00000395315 459 ntBASIC2.97□□□□□ -1.93
SNX3O60493 SNORA11B-201ENST00000408175 129 ntBASIC2.97□□□□□ -1.93
SNX3O60493 RNU6-248P-201ENST00000410720 107 ntBASIC2.97□□□□□ -1.93
SNX3O60493 Y_RNA.625-201ENST00000411256 107 ntBASIC2.97□□□□□ -1.93
SNX3O60493 RNU6-195P-201ENST00000411352 109 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC007919.1-201ENST00000429380 217 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC119618.1-201ENST00000434191 222 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX3O60493 HMGN2P20-201ENST00000437531 273 ntBASIC2.97□□□□□ -1.93
SNX3O60493 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 GAPDHP17-201ENST00000449858 1001 ntBASIC2.97□□□□□ -1.93
SNX3O60493 NUTF2P7-201ENST00000453086 375 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX3O60493 RBM43P1-201ENST00000476891 1081 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX3O60493 RPL12P22-201ENST00000519073 490 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX3O60493 AP000873.5-201ENST00000533906 236 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC128657.1-201ENST00000549459 145 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX3O60493 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX3O60493 AC137800.2-201ENST00000574375 120 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 AC015871.2-201ENST00000603605 948 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC080013.6-201ENST00000606185 215 ntBASIC2.97□□□□□ -1.93
SNX3O60493 RN7SKP299-201ENST00000606679 301 ntBASIC2.97□□□□□ -1.93
SNX3O60493 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX3O60493 AC093783.1-201ENST00000612976 329 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC007318.2-201ENST00000620999 243 ntBASIC2.97□□□□□ -1.93
SNX3O60493 AC090582.1-201ENST00000636321 199 ntBASIC2.97□□□□□ -1.93
SNX3O60493 OR5H6-203ENST00000642105 978 ntBASIC2.97□□□□□ -1.93
SNX3O60493 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNX3O60493 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX3O60493 AC007785.2-201ENST00000598627 1916 ntBASIC2.97□□□□□ -1.93
SNX3O60493 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SNX3O60493 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX3O60493 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX3O60493 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNX3O60493 AL035425.3-201ENST00000564206 4996 ntBASIC2.96□□□□□ -1.94
SNX3O60493 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SNX3O60493 MIR591-201ENST00000385290 95 ntBASIC2.96□□□□□ -1.94
SNX3O60493 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms