Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.27□□□□□ -1.89
ZIC3O60481 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.27□□□□□ -1.89
ZIC3O60481 RN7SL432P-201ENST00000484057 298 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.27□□□□□ -1.89
ZIC3O60481 AC116562.3-201ENST00000506136 177 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 AC117522.1-201ENST00000509821 380 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 RNU6-1281P-201ENST00000516223 105 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 SNORA40.12-201ENST00000516329 111 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 RNU6-835P-201ENST00000516974 104 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC068587.5-201ENST00000528506 175 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.27□□□□□ -1.89
ZIC3O60481 RPS3AP4-201ENST00000555161 764 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 AC234778.2-201ENST00000566241 354 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 MIR4644-201ENST00000579929 84 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.6-201ENST00000603753 252 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.11-201ENST00000604059 253 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AP000907.4-201ENST00000604143 237 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC008162.1-201ENST00000604718 254 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.1-201ENST00000604752 252 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.5-201ENST00000605253 252 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.12-201ENST00000605291 253 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.8-201ENST00000605353 252 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL670379.7-201ENST00000605823 252 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC008536.2-201ENST00000607284 349 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 MIR486-1-201ENST00000612171 68 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL732372.2-225ENST00000642124 456 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 NCAPGP1-201ENST00000505112 1814 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AP001486.2-201ENST00000561652 5113 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 AC066616.2-201ENST00000559334 1481 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL137003.2-201ENST00000606924 2538 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.27□□□□□ -1.89
ZIC3O60481 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
ZIC3O60481 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZIC3O60481 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 SDAD1P2-201ENST00000441308 2028 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZIC3O60481 RNU6-600P-201ENST00000362524 99 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 RNU6-534P-201ENST00000364877 106 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 SMIM11P1-201ENST00000369586 178 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 RNU6-701P-201ENST00000384059 107 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZIC3O60481 NDUFS5P1-201ENST00000405668 289 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC114491.1-201ENST00000416095 246 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 ZNF90P2-204ENST00000419323 1075 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC018630.2-202ENST00000422992 927 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZIC3O60481 CYCSP4-201ENST00000429682 331 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 VDAC1P3-201ENST00000434069 851 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 HSPD1P21-201ENST00000436541 245 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 BNIP3P2-201ENST00000441221 577 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC016691.1-201ENST00000441321 413 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 VN1R34P-201ENST00000447387 883 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.26□□□□□ -1.89
ZIC3O60481 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.26□□□□□ -1.89
ZIC3O60481 MRPS17P3-201ENST00000465453 385 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC092451.1-201ENST00000480211 153 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.26□□□□□ -1.89
ZIC3O60481 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.26□□□□□ -1.89
ZIC3O60481 GMPSP1-201ENST00000514075 579 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.26□□□□□ -1.89
ZIC3O60481 RN7SKP13-201ENST00000515933 244 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 RNU6-840P-201ENST00000517275 65 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 IGKV2D-23-201ENST00000518179 286 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC134698.4-201ENST00000523451 826 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AP006587.4-201ENST00000526053 529 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 MTND1P35-201ENST00000526739 508 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 OR5D17P-201ENST00000531492 978 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AP004242.1-201ENST00000533701 349 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.26□□□□□ -1.89
ZIC3O60481 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.26□□□□□ -1.89
ZIC3O60481 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC074050.1-201ENST00000563247 211 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC034105.3-201ENST00000565294 442 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.26□□□□□ -1.89
ZIC3O60481 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.26□□□□□ -1.89
ZIC3O60481 MIR4775-201ENST00000581168 75 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 MIR3922-201ENST00000585192 84 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC008752.3-201ENST00000588113 712 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC006077.1-201ENST00000604746 343 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 AC002553.4-201ENST00000616896 331 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.26□□□□□ -1.89
ZIC3O60481 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms