Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 TPT1P14-201ENST00000448018 505 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 MTND1P12-201ENST00000455231 147 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH7O60245 snoU109.4-201ENST00000458953 143 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC007182.2-201ENST00000489251 402 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 AC116353.2-201ENST00000505332 712 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 SAP18P1-201ENST00000512058 390 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 Vault.3-201ENST00000516676 95 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 RNA5SP337-201ENST00000517007 109 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH7O60245 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 AL845331.3-202ENST00000562856 261 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC068790.3-201ENST00000602988 553 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 MIR92B-201ENST00000607575 96 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 AC006338.1-201ENST00000618453 749 ntBASIC3.15□□□□□ -1.91
PCDH7O60245 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH7O60245 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH7O60245 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH7O60245 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH7O60245 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH7O60245 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH7O60245 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 AC009902.3-201ENST00000606235 2172 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDH7O60245 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDH7O60245 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 RNU6-169P-201ENST00000365336 107 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 RNU6-359P-201ENST00000365466 108 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 SNORA20.2-201ENST00000383922 131 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 RNU6-483P-201ENST00000384088 108 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 MIR134-201ENST00000385258 73 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDH7O60245 SNORA48.7-201ENST00000391302 135 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 BX323014.1-201ENST00000412876 237 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 USP9YP6-201ENST00000413550 854 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC133104.1-201ENST00000429100 218 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 TIMM9P1-201ENST00000436122 256 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 UBE2V1P13-201ENST00000436983 439 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC108734.1-201ENST00000439549 399 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 HMGB3P8-201ENST00000449709 577 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 FGF7P6-202ENST00000451282 293 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH7O60245 SNORD121B-201ENST00000458838 81 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 HMGB1P29-201ENST00000505659 499 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.14□□□□□ -1.91
PCDH7O60245 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH7O60245 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 SUB1P2-201ENST00000556401 297 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH7O60245 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 NRBF2P1-201ENST00000587407 859 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 BNIP3P22-201ENST00000593399 556 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 IGHV3-29-201ENST00000604817 344 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 Z84480.1-201ENST00000605131 311 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDH7O60245 AC022306.2-201ENST00000617563 647 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC002550.2-201ENST00000621246 394 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AL136313.1-201ENST00000624804 202 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC019226.1-201ENST00000625666 515 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
PCDH7O60245 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDH7O60245 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH7O60245 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH7O60245 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH7O60245 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH7O60245 AC004972.1-201ENST00000623934 2209 ntBASIC3.13□□□□□ -1.91
PCDH7O60245 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms