Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
SGCEO43556 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SGCEO43556 AC007919.1-201ENST00000429380 217 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AC093155.1-201ENST00000440164 826 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RPL31P50-201ENST00000471002 296 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RPS20P22-201ENST00000473700 357 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AC022493.1-201ENST00000492984 337 ntBASIC2.04□□□□□ -2.08
SGCEO43556 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.04□□□□□ -2.08
SGCEO43556 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.04□□□□□ -2.08
SGCEO43556 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.04□□□□□ -2.08
SGCEO43556 RNU1-103P-201ENST00000516502 125 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RNU6-840P-201ENST00000517275 65 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.04□□□□□ -2.08
SGCEO43556 AP005902.1-201ENST00000521358 186 ntBASIC2.04□□□□□ -2.08
SGCEO43556 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SGCEO43556 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.04□□□□□ -2.08
SGCEO43556 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.04□□□□□ -2.08
SGCEO43556 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
SGCEO43556 AC098483.2-201ENST00000603158 454 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.04□□□□□ -2.08
SGCEO43556 AC004520.1-201ENST00000608362 1413 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AP005229.2-201ENST00000609980 697 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AC013562.2-201ENST00000611632 603 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AL603758.1-201ENST00000618654 241 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AC025034.2-201ENST00000623264 286 ntBASIC2.04□□□□□ -2.08
SGCEO43556 AC109454.4-201ENST00000623411 649 ntBASIC2.04□□□□□ -2.08
SGCEO43556 MTND1P37-201ENST00000636562 264 ntBASIC2.04□□□□□ -2.08
SGCEO43556 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SGCEO43556 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SGCEO43556 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SGCEO43556 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
SGCEO43556 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
SGCEO43556 RNU6-468P-201ENST00000384003 109 ntBASIC2.03□□□□□ -2.08
SGCEO43556 RNU6-207P-201ENST00000384137 107 ntBASIC2.03□□□□□ -2.08
SGCEO43556 RNU2-49P-201ENST00000410666 184 ntBASIC2.03□□□□□ -2.08
SGCEO43556 TPMTP3-201ENST00000411928 735 ntBASIC2.03□□□□□ -2.08
SGCEO43556 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.03□□□□□ -2.08
SGCEO43556 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.03□□□□□ -2.08
SGCEO43556 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.03□□□□□ -2.08
SGCEO43556 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AC022447.3-201ENST00000506865 495 ntBASIC2.03□□□□□ -2.08
SGCEO43556 COL6A4P2-205ENST00000509855 506 ntBASIC2.03□□□□□ -2.08
SGCEO43556 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.03□□□□□ -2.08
SGCEO43556 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.03□□□□□ -2.08
SGCEO43556 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.03□□□□□ -2.08
SGCEO43556 AC122134.1-202ENST00000569111 1201 ntBASIC2.03□□□□□ -2.08
SGCEO43556 MIR5571-201ENST00000577998 113 ntBASIC2.03□□□□□ -2.08
SGCEO43556 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
SGCEO43556 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.03□□□□□ -2.08
SGCEO43556 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.03□□□□□ -2.08
SGCEO43556 AL390208.1-201ENST00000605885 644 ntBASIC2.03□□□□□ -2.08
SGCEO43556 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.03□□□□□ -2.08
SGCEO43556 AC046143.2-201ENST00000609789 160 ntBASIC2.03□□□□□ -2.08
SGCEO43556 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.03□□□□□ -2.08
SGCEO43556 MIR7157-201ENST00000635801 60 ntBASIC2.03□□□□□ -2.08
SGCEO43556 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SGCEO43556 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SGCEO43556 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SGCEO43556 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.02□□□□□ -2.09
SGCEO43556 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
SGCEO43556 AC107982.1-201ENST00000507171 1300 ntBASIC2.02□□□□□ -2.09
SGCEO43556 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SGCEO43556 RNU6-884P-201ENST00000363889 107 ntBASIC2.02□□□□□ -2.09
SGCEO43556 Y_RNA.510-201ENST00000384511 114 ntBASIC2.02□□□□□ -2.09
SGCEO43556 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.02□□□□□ -2.09
SGCEO43556 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SGCEO43556 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.02□□□□□ -2.09
SGCEO43556 MICF-203ENST00000432679 129 ntBASIC2.02□□□□□ -2.09
SGCEO43556 RPS15AP28-201ENST00000435088 386 ntBASIC2.02□□□□□ -2.09
SGCEO43556 MTND4P15-201ENST00000437913 1033 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.02□□□□□ -2.09
SGCEO43556 MTATP6P7-201ENST00000453315 681 ntBASIC2.02□□□□□ -2.09
SGCEO43556 snoU13.8-201ENST00000458890 104 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC025755.1-201ENST00000521306 278 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.02□□□□□ -2.09
SGCEO43556 AC009097.3-201ENST00000563557 1018 ntBASIC2.02□□□□□ -2.09
SGCEO43556 MIR5007-201ENST00000583098 95 ntBASIC2.02□□□□□ -2.09
SGCEO43556 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.02□□□□□ -2.09
SGCEO43556 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.02□□□□□ -2.09
SGCEO43556 AC025588.2-201ENST00000604851 466 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AL583856.2-201ENST00000606298 543 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC120053.1-201ENST00000607706 736 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC078880.5-201ENST00000617845 421 ntBASIC2.02□□□□□ -2.09
SGCEO43556 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.02□□□□□ -2.09
SGCEO43556 AC009159.1-201ENST00000618386 642 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AC253576.2-201ENST00000618815 580 ntBASIC2.02□□□□□ -2.09
SGCEO43556 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
SGCEO43556 AL031601.2-202ENST00000622650 282 ntBASIC2.02□□□□□ -2.09
SGCEO43556 SCARNA15.3-201ENST00000626315 122 ntBASIC2.02□□□□□ -2.09
SGCEO43556 SCARNA4.1-201ENST00000628597 123 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
SGCEO43556 AL163152.1-201ENST00000642001 374 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms