Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 LTV1P1-201ENST00000510683 1237 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGB3O15347 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMGB3O15347 RNU4-29P-201ENST00000515943 174 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 RNU6-885P-201ENST00000516607 104 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 HMGN1P28-201ENST00000521340 364 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.56□□□□□ -2.16
HMGB3O15347 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMGB3O15347 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGB3O15347 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGB3O15347 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMGB3O15347 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGB3O15347 DNAJC19P3-201ENST00000594491 331 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGB3O15347 RMST_10.1-201ENST00000616309 154 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 AC010378.1-201ENST00000619270 362 ntBASIC1.56□□□□□ -2.16
HMGB3O15347 AC010889.1-201ENST00000566193 2666 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC006020.1-201ENST00000420179 1854 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 RNA5SP289-201ENST00000362332 137 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 RNU6-1159P-201ENST00000362933 107 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 RNU6-140P-201ENST00000384566 108 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AL109755.1-201ENST00000401791 649 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 U6atac.2-201ENST00000408644 118 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 RNU2-20P-201ENST00000410425 191 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AL592310.1-201ENST00000414330 671 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 PPP1R11P2-201ENST00000423543 382 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 RAC1P8-201ENST00000427086 527 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 MTND4LP14-201ENST00000429447 288 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 RPL23AP83-201ENST00000434984 473 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 MTND5P8-201ENST00000449817 1083 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGB3O15347 RPL21P134-201ENST00000453468 483 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 SUMO2P2-201ENST00000456482 255 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 CDC42P1-201ENST00000456658 548 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC107032.1-201ENST00000485945 480 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGB3O15347 RNA5SP356-201ENST00000515972 94 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 AP001317.1-201ENST00000531194 960 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB3O15347 MIR4299-201ENST00000577899 72 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 MIR3200-201ENST00000580767 85 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 MIR3944-201ENST00000581277 108 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGB3O15347 AL355297.2-201ENST00000604792 129 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC069294.1-201ENST00000608397 350 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC004067.1-201ENST00000608733 700 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 MIR7106-201ENST00000612419 65 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC104307.1-201ENST00000616142 196 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC244517.12-201ENST00000623581 663 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC106730.3-201ENST00000624568 641 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AC026634.1-201ENST00000634369 198 ntBASIC1.55□□□□□ -2.16
HMGB3O15347 AP006437.1-201ENST00000641440 3685 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGB3O15347 MIR147B-201ENST00000390185 80 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AL031679.1-201ENST00000400616 525 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 TMSB4XP8-201ENST00000402089 135 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC019129.1-201ENST00000403786 261 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 BTF3P7-201ENST00000407097 488 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AL136133.1-201ENST00000413694 376 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 TMSB4XP6-201ENST00000415187 135 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 CCDC58P2-201ENST00000417131 366 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC096920.1-201ENST00000423991 241 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 FAM204CP-201ENST00000424489 642 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 TMSB4XP1-201ENST00000424567 135 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 RPL30P4-201ENST00000429309 333 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 MED14P1-201ENST00000430517 648 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGB3O15347 GTF2IP7-202ENST00000436677 309 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC007000.2-201ENST00000442564 487 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 HIGD1AP2-201ENST00000446367 280 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGB3O15347 MTND2P24-201ENST00000453434 806 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGB3O15347 RPL26P9-201ENST00000457466 433 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC126389.1-201ENST00000477436 290 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC025181.1-201ENST00000477507 416 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC091917.2-201ENST00000505002 744 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC091965.2-201ENST00000512324 613 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGB3O15347 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGB3O15347 CBX3P7-201ENST00000532876 502 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC090502.2-201ENST00000549267 280 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AL359212.1-201ENST00000556608 614 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 MIR5089-201ENST00000580047 84 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGB3O15347 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGB3O15347 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGB3O15347 AL391813.1-201ENST00000603098 260 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC136601.2-201ENST00000604356 474 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms