Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC100793.4-201ENST00000613683 429 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AC093591.3-201ENST00000634516 308 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 ZNF826P-207ENST00000622273 1910 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 PABPC1P9-201ENST00000426076 1612 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.9□□□□□ -1.78
NPHP1O15259 MAPK10-362ENST00000641864 4484 ntBASIC3.9□□□□□ -1.78
NPHP1O15259 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NPHP1O15259 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP1O15259 RNA5SP229-201ENST00000410809 99 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 RPL7P8-201ENST00000411964 730 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.9□□□□□ -1.79
NPHP1O15259 AC092047.1-201ENST00000424997 240 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AL353777.1-201ENST00000425552 326 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC092447.3-201ENST00000426027 686 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP1O15259 TIMM9P1-201ENST00000436122 256 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC118469.1-201ENST00000442943 488 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP1O15259 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.9□□□□□ -1.79
NPHP1O15259 RN7SL429P-201ENST00000479090 223 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 RN7SL489P-201ENST00000486185 223 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 RN7SL327P-201ENST00000488659 223 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.9□□□□□ -1.79
NPHP1O15259 RNA5SP356-201ENST00000515972 94 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 RNU6-390P-201ENST00000516259 103 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.9□□□□□ -1.79
NPHP1O15259 MTND4LP18-201ENST00000526864 291 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC007115.1-201ENST00000546853 234 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.9□□□□□ -1.79
NPHP1O15259 AC010653.1-201ENST00000571108 881 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC008507.1-201ENST00000587506 734 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 WISP1-OT1-201ENST00000602893 642 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AL391813.2-201ENST00000609113 322 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC108747.1-201ENST00000609508 535 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC122133.1-201ENST00000613964 233 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 RN7SL853P-201ENST00000617250 223 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 SNHG22-203ENST00000617833 660 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP1O15259 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP1O15259 AC010680.1-201ENST00000590024 3590 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 AC110774.1-201ENST00000623567 2018 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NPHP1O15259 FAM35BP-202ENST00000497389 3337 ntBASIC3.9□□□□□ -1.79
NPHP1O15259 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP1O15259 OR5J1P-201ENST00000313544 939 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP1O15259 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP1O15259 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP1O15259 RNU6-1035P-201ENST00000384477 107 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 Y_RNA.560-201ENST00000384689 102 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NPHP1O15259 AL359634.1-202ENST00000404721 284 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 RNU2-33P-201ENST00000410344 192 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 RN7SKP220-201ENST00000410611 288 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 RNU6-920P-201ENST00000410926 92 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP1O15259 MTATP6P30-201ENST00000443540 664 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC020550.1-201ENST00000447385 163 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP1O15259 AC108059.3-201ENST00000456388 214 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC104472.2-201ENST00000469035 601 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.89□□□□□ -1.79
NPHP1O15259 AC091826.1-201ENST00000514065 313 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP1O15259 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP1O15259 AC123904.2-201ENST00000548059 300 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
NPHP1O15259 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP1O15259 AC002545.1-201ENST00000592511 181 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC079089.3-201ENST00000603094 673 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC103710.1-201ENST00000610003 901 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP1O15259 AC104010.1-201ENST00000616889 150 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC009159.1-201ENST00000618386 642 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AF246928.1-201ENST00000623768 87 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AP003122.6-201ENST00000623831 495 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC091903.1-201ENST00000624322 454 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AL136313.1-201ENST00000624804 202 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP1O15259 MTND1P37-201ENST00000636562 264 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP1O15259 MIR7153-201ENST00000637758 57 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.89□□□□□ -1.79
NPHP1O15259 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
NPHP1O15259 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP1O15259 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP1O15259 AC022336.2-201ENST00000568966 2538 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPHP1O15259 AL031577.2-201ENST00000404133 280 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 Z99497.1-201ENST00000421282 135 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.88□□□□□ -1.79
NPHP1O15259 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPHP1O15259 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.88□□□□□ -1.79
NPHP1O15259 Z99127.3-201ENST00000448158 395 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 EPS15P1-201ENST00000448836 336 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 AC006539.3-201ENST00000454258 129 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.88□□□□□ -1.79
NPHP1O15259 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHP1O15259 AC098862.1-201ENST00000504991 413 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms