Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC093908.1-201ENST00000623125 8092 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 RNU6-432P-201ENST00000384196 109 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 Y_RNA.500-201ENST00000384466 111 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 FCF1P10-201ENST00000407590 479 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 RNU4-65P-201ENST00000410473 140 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AC090774.1-201ENST00000435925 246 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AL353706.1-201ENST00000436728 494 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 RPS12P18-201ENST00000442381 270 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 USP9YP29-201ENST00000445112 563 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 SSXP4-201ENST00000451349 245 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 RPS29P26-201ENST00000477483 171 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 KCTD9P5-201ENST00000504141 1170 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC114967.1-201ENST00000504890 259 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AC022447.1-201ENST00000515358 464 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AP002453.2-201ENST00000533503 320 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.49□□□□□ -1.85
ATP2A1O14983 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATP2A1O14983 AC123904.2-201ENST00000548059 300 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC034105.3-201ENST00000565294 442 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC006362.1-201ENST00000567392 174 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 MIR4474-201ENST00000579189 78 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.49□□□□□ -1.85
ATP2A1O14983 AL355810.1-201ENST00000614629 552 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 AC112204.3-201ENST00000623822 332 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 MIR4275-201ENST00000636486 87 ntBASIC3.49□□□□□ -1.85
ATP2A1O14983 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATP2A1O14983 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.48□□□□□ -1.85
ATP2A1O14983 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.48□□□□□ -1.85
ATP2A1O14983 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATP2A1O14983 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.48□□□□□ -1.85
ATP2A1O14983 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
ATP2A1O14983 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
ATP2A1O14983 RNU5A-8P-201ENST00000364102 114 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 U3.11-201ENST00000364476 212 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 Y_RNA.318-201ENST00000365131 97 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 SNORA40.3-201ENST00000390964 122 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC110754.1-201ENST00000399740 601 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 EEF1A1P41-201ENST00000414667 207 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 MTATP6P4-201ENST00000427725 675 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 PGBD4P3-201ENST00000440731 581 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC025750.2-201ENST00000442609 450 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AL033528.1-201ENST00000453780 140 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 RPL23AP31-201ENST00000456160 467 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 snoU109.1-201ENST00000459339 135 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 RAP1BP2-201ENST00000478270 544 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AC083906.5-201ENST00000503722 328 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AP000857.1-201ENST00000532151 543 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AC125611.2-201ENST00000551907 647 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 RPL21P5-201ENST00000554662 472 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AL157394.1-201ENST00000562983 1224 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC009977.1-201ENST00000586015 570 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.48□□□□□ -1.85
ATP2A1O14983 AC121334.2-201ENST00000605387 271 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC007038.2-201ENST00000608095 740 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC131902.3-201ENST00000611767 581 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC093838.1-201ENST00000613014 469 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC010678.1-201ENST00000614118 713 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC009509.4-201ENST00000619202 509 ntBASIC3.48□□□□□ -1.85
ATP2A1O14983 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ATP2A1O14983 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.48□□□□□ -1.85
ATP2A1O14983 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ATP2A1O14983 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATP2A1O14983 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATP2A1O14983 TEX21P-201ENST00000447107 1476 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AL136164.4-201ENST00000625013 2135 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATP2A1O14983 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATP2A1O14983 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ATP2A1O14983 DDX10P1-201ENST00000448545 1933 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 ZNF826P-207ENST00000622273 1910 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ATP2A1O14983 RNU6-223P-201ENST00000362830 107 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 RNU5E-8P-201ENST00000363502 116 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ATP2A1O14983 DEFB109C-201ENST00000382575 264 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 DEFB109B-201ENST00000382656 264 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 RNU6-851P-201ENST00000384565 107 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.47□□□□□ -1.85
ATP2A1O14983 PPP1R11P2-201ENST00000423543 382 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AC024082.2-201ENST00000434771 238 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms