Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3D1O14617 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.28□□□□□ -1.88
AP3D1O14617 AC106785.1-201ENST00000565935 262 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 AC104763.2-201ENST00000604179 382 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 AC004832.5-201ENST00000608677 401 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 AC022149.2-201ENST00000621061 203 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 AC244100.1-202ENST00000621554 382 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3D1O14617 AC093010.3-201ENST00000570269 15214 ntBASIC3.28□□□□□ -1.88
AP3D1O14617 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3D1O14617 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
AP3D1O14617 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
AP3D1O14617 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.89
AP3D1O14617 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
AP3D1O14617 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
AP3D1O14617 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 Y_RNA.77-201ENST00000362962 107 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 RNU6-512P-201ENST00000364438 103 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 RPS3AP36-201ENST00000398190 775 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 RNU6-55P-201ENST00000411092 107 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 RNU6-954P-201ENST00000411355 107 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 CYCSP19-201ENST00000411715 316 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 ELOCP4-201ENST00000420090 333 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3D1O14617 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3D1O14617 GPM6BP2-201ENST00000432046 144 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC104850.1-201ENST00000435940 476 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.27□□□□□ -1.89
AP3D1O14617 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.27□□□□□ -1.89
AP3D1O14617 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.27□□□□□ -1.89
AP3D1O14617 NOTCH2P1-201ENST00000443481 624 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AL357552.1-201ENST00000445254 415 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 GPM6BP1-201ENST00000446387 144 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3D1O14617 GAPDHP17-201ENST00000449858 1001 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC073387.1-201ENST00000453261 709 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
AP3D1O14617 HMGN1P11-201ENST00000508668 303 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 MTND4LP31-201ENST00000514859 294 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC022616.3-201ENST00000523940 148 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3D1O14617 AL359212.1-201ENST00000556608 614 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3D1O14617 AC010620.1-201ENST00000601088 1102 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 AC015871.2-201ENST00000603605 948 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 U2.21-201ENST00000637295 81 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 MTND5P42-201ENST00000637720 498 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 FARSBP1-201ENST00000435808 1778 ntBASIC3.27□□□□□ -1.89
AP3D1O14617 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP3D1O14617 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP3D1O14617 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
AP3D1O14617 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3D1O14617 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3D1O14617 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3D1O14617 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3D1O14617 RNA5SP124-201ENST00000362739 110 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RNU6-884P-201ENST00000363889 107 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RNY4P34-201ENST00000364779 95 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RNU6-39P-201ENST00000384344 107 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 AL035423.1-201ENST00000420331 213 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AL645937.1-202ENST00000421799 937 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 HSPD1P21-201ENST00000436541 245 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3D1O14617 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3D1O14617 RPS3AP46-201ENST00000448352 682 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 RPS4XP2-201ENST00000458402 793 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RNU6-953P-201ENST00000459154 107 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RN7SL594P-201ENST00000470590 287 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RPS4XP22-201ENST00000480755 780 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RPL39P36-201ENST00000490784 156 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3D1O14617 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 RNA5SP165-201ENST00000517142 115 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AP006245.1-201ENST00000522549 120 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AP002453.2-201ENST00000533503 320 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AC026333.2-201ENST00000542164 106 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3D1O14617 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3D1O14617 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3D1O14617 MIR3167-201ENST00000579623 85 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3D1O14617 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3D1O14617 SEPT7P9-203ENST00000604116 343 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AL121772.2-201ENST00000614331 297 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AC110079.1-202ENST00000635213 138 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AP003399.1-201ENST00000637534 361 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 TEX21P-201ENST00000447107 1476 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 AC058791.1-201ENST00000608412 3198 ntBASIC3.26□□□□□ -1.89
AP3D1O14617 MTND5P7-201ENST00000413558 1798 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms