Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AP000860.1-201ENST00000605250 559 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 RNU6-87P-201ENST00000607561 108 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN4O14493 AC239868.4-201ENST00000608318 671 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN4O14493 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 uc_338.12-201ENST00000616344 181 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC006338.1-201ENST00000618453 749 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN4O14493 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN4O14493 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN4O14493 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CLDN4O14493 AC058791.1-201ENST00000608412 3198 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CLDN4O14493 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CLDN4O14493 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CLDN4O14493 U3.4-201ENST00000363352 213 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN4O14493 RNY3P10-201ENST00000384764 102 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 RNU2-62P-201ENST00000410868 191 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 AC005326.1-201ENST00000429197 123 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 AC244035.1-201ENST00000430042 390 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 PIGFP3-201ENST00000441918 722 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 Z99127.3-201ENST00000448158 395 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN4O14493 Y_RNA.688-201ENST00000516565 95 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLDN4O14493 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN4O14493 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN4O14493 ACTR3BP3-201ENST00000565577 979 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 AC012414.6-201ENST00000568241 401 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 MIR3609-201ENST00000582661 80 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 HMGN1P30-201ENST00000589286 268 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 CKS1BP3-201ENST00000600888 237 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 Z94722.1-201ENST00000604328 474 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 AC068276.1-201ENST00000605793 379 ntBASIC3.09□□□□□ -1.91
CLDN4O14493 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN4O14493 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN4O14493 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN4O14493 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.92
CLDN4O14493 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN4O14493 FAM35BP-202ENST00000497389 3337 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CLDN4O14493 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CLDN4O14493 OR1S2-201ENST00000302592 978 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 RNU6-1284P-201ENST00000363701 100 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 MIR128-1-201ENST00000384921 82 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN4O14493 RNA5SP252-201ENST00000391131 119 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 NDUFB4P5-201ENST00000415445 361 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC019097.1-201ENST00000424783 735 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN4O14493 RPL7P46-201ENST00000425129 740 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.08□□□□□ -1.92
CLDN4O14493 FCF1P1-201ENST00000432690 571 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN4O14493 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 COX6CP2-201ENST00000444980 225 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 MTND2P4-201ENST00000445034 1004 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 TAF9P1-201ENST00000445421 515 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC016696.1-201ENST00000446949 318 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 TAF9P2-201ENST00000454958 515 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN4O14493 SNRPFP4-201ENST00000456366 242 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN4O14493 RPS20P22-201ENST00000473700 357 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 KC877373.1-201ENST00000479066 408 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AL049873.1-201ENST00000480540 376 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN4O14493 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN4O14493 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN4O14493 MTND5P13-201ENST00000513046 1079 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 MIR2276-201ENST00000516886 89 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC090136.1-201ENST00000520009 240 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AP003122.4-201ENST00000530980 758 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
CLDN4O14493 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN4O14493 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN4O14493 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
CLDN4O14493 RPL21P5-201ENST00000554662 472 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN4O14493 AC009977.1-201ENST00000586015 570 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN4O14493 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN4O14493 BNIP3P8-201ENST00000597863 560 ntBASIC3.08□□□□□ -1.92
CLDN4O14493 AC004832.5-201ENST00000608677 401 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms