Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SKP226-201ENST00000364912 300 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.58□□□□□ -2.16
SDCBPO00560 Y_RNA.548-201ENST00000384656 105 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 MIR23A-201ENST00000385245 73 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 SNORA46.1-201ENST00000391069 153 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SDCBPO00560 RNU2-28P-201ENST00000410457 189 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 Z85995.1-201ENST00000415547 335 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC007742.1-201ENST00000425789 329 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AL512844.2-201ENST00000433990 593 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 ELOCP26-201ENST00000436067 329 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.58□□□□□ -2.16
SDCBPO00560 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SDCBPO00560 TRGVB-201ENST00000453257 471 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC097493.1-201ENST00000463958 372 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.58□□□□□ -2.16
SDCBPO00560 AC106872.3-201ENST00000495104 446 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC091860.1-201ENST00000505723 432 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.58□□□□□ -2.16
SDCBPO00560 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.58□□□□□ -2.16
SDCBPO00560 HSPE1P18-201ENST00000517602 280 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.58□□□□□ -2.16
SDCBPO00560 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.58□□□□□ -2.16
SDCBPO00560 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.58□□□□□ -2.16
SDCBPO00560 AC008749.1-201ENST00000597650 306 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.58□□□□□ -2.16
SDCBPO00560 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.58□□□□□ -2.16
SDCBPO00560 YWHAEP7-203ENST00000622054 312 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AL158801.5-201ENST00000623123 465 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AL512506.2-201ENST00000624472 458 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC026634.1-201ENST00000634369 198 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 DDX10P1-201ENST00000448545 1933 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 MTND4P21-201ENST00000453886 1357 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SDCBPO00560 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SDCBPO00560 RNU6-878P-201ENST00000384578 110 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AC019129.1-201ENST00000403786 261 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.57□□□□□ -2.16
SDCBPO00560 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.57□□□□□ -2.16
SDCBPO00560 SPA17P1-201ENST00000416656 452 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 MTCO3P1-205ENST00000422088 832 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 NDUFB4P7-201ENST00000423198 363 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.57□□□□□ -2.16
SDCBPO00560 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.57□□□□□ -2.16
SDCBPO00560 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.57□□□□□ -2.16
SDCBPO00560 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 RPL7P55-201ENST00000450522 746 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.57□□□□□ -2.16
SDCBPO00560 RPL32P14-201ENST00000463196 378 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.57□□□□□ -2.16
SDCBPO00560 AC025181.1-201ENST00000477507 416 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 TRBV12-1-201ENST00000479785 344 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AC013828.1-201ENST00000481845 158 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AL049874.1-201ENST00000489560 388 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 RPS29P20-201ENST00000489592 171 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AC090453.1-201ENST00000495560 436 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.57□□□□□ -2.16
SDCBPO00560 RNU6-1256P-201ENST00000516539 103 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 RNU6-1282P-201ENST00000516735 96 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SDCBPO00560 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SDCBPO00560 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.57□□□□□ -2.16
SDCBPO00560 AC091544.4-201ENST00000555268 342 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AC093510.2-201ENST00000562820 896 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.57□□□□□ -2.16
SDCBPO00560 MTATP6P25-201ENST00000574491 261 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 MIR4789-201ENST00000577469 82 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 MIR3616-201ENST00000584070 92 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.57□□□□□ -2.16
SDCBPO00560 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.57□□□□□ -2.16
SDCBPO00560 AC011330.2-201ENST00000621680 635 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 U6.101-201ENST00000637707 76 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
SDCBPO00560 OR4G2P-202ENST00000641004 1759 ntBASIC1.57□□□□□ -2.16
SDCBPO00560 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.56□□□□□ -2.16
SDCBPO00560 FAM133CP-201ENST00000332869 704 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SDCBPO00560 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SDCBPO00560 SNORA16B-201ENST00000364674 135 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SDCBPO00560 RNU6-220P-201ENST00000390919 107 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 NPM1P10-201ENST00000398310 865 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 SNORD23.1-201ENST00000408212 104 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 MIR1290-201ENST00000408735 78 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 RNU2-2P-201ENST00000410396 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 RNU6-920P-201ENST00000410926 92 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC027644.1-201ENST00000419595 298 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.56□□□□□ -2.16
SDCBPO00560 AL445685.2-201ENST00000422551 342 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC007560.1-201ENST00000426912 237 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 MTCYBP32-201ENST00000427945 1084 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 ARF4P4-201ENST00000439608 520 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 BMI1P1-201ENST00000445879 941 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 VN1R10P-201ENST00000447106 875 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC005297.2-201ENST00000450430 606 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.56□□□□□ -2.16
SDCBPO00560 PPP1R2P5-201ENST00000457256 603 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 SNORA59A-201ENST00000459326 152 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 RPL23AP41-201ENST00000484754 458 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms