Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.32□□□□□ -1.72
CBX4O00257 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.32□□□□□ -1.72
CBX4O00257 MIR8059-201ENST00000620427 81 ntBASIC4.32□□□□□ -1.72
CBX4O00257 AP003400.5-201ENST00000624827 617 ntBASIC4.32□□□□□ -1.72
CBX4O00257 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.32□□□□□ -1.72
CBX4O00257 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CBX4O00257 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CBX4O00257 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CBX4O00257 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.31□□□□□ -1.72
CBX4O00257 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.31□□□□□ -1.72
CBX4O00257 RNU1-15P-201ENST00000353977 144 ntBASIC4.31□□□□□ -1.72
CBX4O00257 SNORD113-7-201ENST00000363762 77 ntBASIC4.31□□□□□ -1.72
CBX4O00257 RNU6-434P-201ENST00000384376 107 ntBASIC4.31□□□□□ -1.72
CBX4O00257 RNU6-393P-201ENST00000384475 107 ntBASIC4.31□□□□□ -1.72
CBX4O00257 RNA5SP372-201ENST00000390836 115 ntBASIC4.31□□□□□ -1.72
CBX4O00257 SNORD70.1-201ENST00000391007 85 ntBASIC4.31□□□□□ -1.72
CBX4O00257 EIF4E2P1-201ENST00000393781 255 ntBASIC4.31□□□□□ -1.72
CBX4O00257 AL139039.1-201ENST00000401900 692 ntBASIC4.31□□□□□ -1.72
CBX4O00257 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.31□□□□□ -1.72
CBX4O00257 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.31□□□□□ -1.72
CBX4O00257 HSFY6P-201ENST00000445573 403 ntBASIC4.31□□□□□ -1.72
CBX4O00257 NDUFS5P3-201ENST00000450668 321 ntBASIC4.31□□□□□ -1.72
CBX4O00257 AL645939.1-201ENST00000453429 797 ntBASIC4.31□□□□□ -1.72
CBX4O00257 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CBX4O00257 MTCO3P9-201ENST00000506989 781 ntBASIC4.31□□□□□ -1.72
CBX4O00257 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.31□□□□□ -1.72
CBX4O00257 AC023141.12-201ENST00000512399 199 ntBASIC4.31□□□□□ -1.72
CBX4O00257 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.31□□□□□ -1.72
CBX4O00257 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.31□□□□□ -1.72
CBX4O00257 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
CBX4O00257 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.31□□□□□ -1.72
CBX4O00257 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.31□□□□□ -1.72
CBX4O00257 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.31□□□□□ -1.72
CBX4O00257 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CBX4O00257 AC034102.8-201ENST00000615146 484 ntBASIC4.31□□□□□ -1.72
CBX4O00257 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CBX4O00257 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CBX4O00257 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CBX4O00257 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CBX4O00257 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.31□□□□□ -1.72
CBX4O00257 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CBX4O00257 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 Z82217.1-201ENST00000625157 8149 ntBASIC4.3□□□□□ -1.72
CBX4O00257 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
CBX4O00257 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.3□□□□□ -1.72
CBX4O00257 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 Y_RNA.184-201ENST00000363884 108 ntBASIC4.3□□□□□ -1.72
CBX4O00257 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 Y_RNA.460-201ENST00000384255 102 ntBASIC4.3□□□□□ -1.72
CBX4O00257 MIR670-201ENST00000390142 98 ntBASIC4.3□□□□□ -1.72
CBX4O00257 RNA5SP219-201ENST00000390940 113 ntBASIC4.3□□□□□ -1.72
CBX4O00257 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AL160275.3-201ENST00000423876 471 ntBASIC4.3□□□□□ -1.72
CBX4O00257 RPL27AP8-201ENST00000424277 446 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AL117339.2-201ENST00000430475 180 ntBASIC4.3□□□□□ -1.72
CBX4O00257 NDUFA5P4-201ENST00000436704 385 ntBASIC4.3□□□□□ -1.72
CBX4O00257 TXNP1-201ENST00000441872 371 ntBASIC4.3□□□□□ -1.72
CBX4O00257 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.3□□□□□ -1.72
CBX4O00257 AC087588.1-201ENST00000462203 316 ntBASIC4.3□□□□□ -1.72
CBX4O00257 TRBVA-201ENST00000498804 316 ntBASIC4.3□□□□□ -1.72
CBX4O00257 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.3□□□□□ -1.72
CBX4O00257 AC099522.1-202ENST00000514718 367 ntBASIC4.3□□□□□ -1.72
CBX4O00257 SNORA31.8-201ENST00000516327 108 ntBASIC4.3□□□□□ -1.72
CBX4O00257 SCARNA15.2-201ENST00000516409 127 ntBASIC4.3□□□□□ -1.72
CBX4O00257 Y_RNA.691-201ENST00000516611 103 ntBASIC4.3□□□□□ -1.72
CBX4O00257 RNU1-45P-201ENST00000517191 141 ntBASIC4.3□□□□□ -1.72
CBX4O00257 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.3□□□□□ -1.72
CBX4O00257 RANP9-201ENST00000519957 271 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.3□□□□□ -1.72
CBX4O00257 AC093027.1-201ENST00000546698 429 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.3□□□□□ -1.72
CBX4O00257 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.3□□□□□ -1.72
CBX4O00257 AL355375.2-201ENST00000574825 175 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.3□□□□□ -1.72
CBX4O00257 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.3□□□□□ -1.72
CBX4O00257 CTHRC1P1-201ENST00000605383 469 ntBASIC4.3□□□□□ -1.72
CBX4O00257 Z82243.1-201ENST00000609432 473 ntBASIC4.3□□□□□ -1.72
CBX4O00257 MIR6867-201ENST00000610636 67 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AC006133.1-201ENST00000617106 264 ntBASIC4.3□□□□□ -1.72
CBX4O00257 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.3□□□□□ -1.72
CBX4O00257 AC090574.1-201ENST00000623186 233 ntBASIC4.3□□□□□ -1.72
CBX4O00257 MTND1P37-201ENST00000636562 264 ntBASIC4.3□□□□□ -1.72
CBX4O00257 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 AL133243.3-201ENST00000617415 3004 ntBASIC4.3□□□□□ -1.72
CBX4O00257 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CBX4O00257 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CBX4O00257 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.3□□□□□ -1.72
CBX4O00257 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CBX4O00257 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
CBX4O00257 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms