Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC009237.6-201ENST00000446969 424 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 HMGN2P10-201ENST00000448085 265 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC108938.1-201ENST00000451204 136 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SLC25A15P5-201ENST00000508033 253 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC026801.2-201ENST00000515352 425 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORA44.1-201ENST00000517031 108 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AP002748.2-201ENST00000528671 348 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 GTF3AP2-201ENST00000557014 266 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC026464.5-201ENST00000562497 722 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC080013.4-201ENST00000607624 649 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC091925.2-201ENST00000625059 256 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC005832.2-201ENST00000538921 1430 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 ZNF876P-202ENST00000398732 1485 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORA36C-201ENST00000384289 132 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR30A-201ENST00000385092 71 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AL079342.1-201ENST00000401460 267 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORA11B-201ENST00000408175 129 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 RNA5SP184-201ENST00000411071 108 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 VTA1P1-201ENST00000414044 866 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 OFD1P11Y-201ENST00000418213 1177 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC092047.1-201ENST00000424997 240 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 TOMM22P2-201ENST00000430735 237 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AP000949.1-201ENST00000438328 629 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 BNIP3P2-201ENST00000441221 577 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 PIGFP3-201ENST00000441918 722 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC007677.1-201ENST00000445757 515 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC007182.2-201ENST00000489251 402 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC099513.1-201ENST00000490423 301 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 RPS29P11-201ENST00000496507 171 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AP000926.3-201ENST00000497201 299 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 DUXAP1-201ENST00000556632 463 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC106785.1-201ENST00000565935 262 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AP003973.1-201ENST00000604639 691 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC007349.4-201ENST00000608114 532 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AL121652.1-201ENST00000608851 448 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC103710.2-201ENST00000609912 942 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC009233.1-201ENST00000616477 371 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AL162233.1-201ENST00000620014 944 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 AC008443.7-201ENST00000622195 246 ntBASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CHKB-CPT1BH3BT56 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORD82-201ENST00000365530 70 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL024474.1-201ENST00000404655 591 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC009310.1-201ENST00000414414 451 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 RPL23AP39-201ENST00000415533 405 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 RPS24P7-201ENST00000416921 246 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL807761.1-201ENST00000417622 171 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC015922.2-201ENST00000435593 184 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 RPL26P6-201ENST00000440913 438 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 SUMO2P2-201ENST00000456482 255 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AP1S2P1-201ENST00000457344 379 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 MTCYBP35-201ENST00000503630 1137 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC008549.1-201ENST00000512900 643 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 RNU1-103P-201ENST00000516502 125 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 DUXAP5-201ENST00000529668 529 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AP001317.1-201ENST00000531194 960 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 OR8K4P-201ENST00000534608 872 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC234778.2-201ENST00000566241 354 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL391813.1-201ENST00000603098 260 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC008739.3-201ENST00000603262 127 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.6-201ENST00000603753 252 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.11-201ENST00000604059 253 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.10-201ENST00000604330 253 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC008162.1-201ENST00000604718 254 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.1-201ENST00000604752 252 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.2-201ENST00000604983 252 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.5-201ENST00000605253 252 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms