Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL133271.1-201ENST00000538229 291 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL157394.1-201ENST00000562983 1224 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL022161.1-201ENST00000604390 213 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC004067.1-201ENST00000608733 700 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL355472.4-201ENST00000610233 626 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC104010.1-201ENST00000616889 150 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC009268.2-201ENST00000621925 457 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC006111.3-201ENST00000622137 383 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC007494.3-201ENST00000624660 743 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092125.1-201ENST00000562568 1995 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 PABPC1P9-201ENST00000426076 1612 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL138713.1-201ENST00000624026 2130 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 DEFB108F-201ENST00000344638 222 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC062016.1-201ENST00000355719 319 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU5F-6P-201ENST00000362979 116 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL354719.1-201ENST00000406535 843 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 CCNG1P1-201ENST00000406783 885 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU4-65P-201ENST00000410473 140 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC109780.2-201ENST00000413467 845 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL21P32-201ENST00000419877 477 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 NUP35P1-201ENST00000422734 947 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC093151.1-201ENST00000427711 313 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 GAPDHP27-201ENST00000447427 1020 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 TPT1P14-201ENST00000448018 505 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC108938.1-201ENST00000451204 136 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 MTND3P7-201ENST00000474435 343 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC055855.1-201ENST00000489563 579 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 MTND2P38-201ENST00000522536 667 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 DEFB108D-201ENST00000527787 222 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC105224.1-201ENST00000587055 421 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL109653.1-201ENST00000603091 248 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC004696.1-201ENST00000614345 607 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL603758.1-201ENST00000618654 241 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC008443.7-201ENST00000622195 246 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AC078883.4-201ENST00000623218 367 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 AL136360.1-201ENST00000503377 1900 ntBASIC2.89□□□□□ -1.95
NEDD8-MDP1E9PL57 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 Y_RNA.46-201ENST00000362695 102 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 U8.9-201ENST00000365667 134 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORA36C-201ENST00000384289 132 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR19A-201ENST00000384878 82 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 RPS20P2-201ENST00000402520 389 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 RN7SKP58-201ENST00000411010 305 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU6-516P-201ENST00000411381 104 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC063976.3-201ENST00000426849 329 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORD109B-201ENST00000458961 67 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORD109A-201ENST00000459128 67 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms