Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-123P-201ENST00000516163 102 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RNA5SP73-201ENST00000516744 108 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC087241.2-201ENST00000535801 324 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RN7SL290P-201ENST00000578661 300 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AL138889.2-201ENST00000603883 242 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC013553.2-201ENST00000604244 589 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC009233.1-201ENST00000616477 371 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC009248.2-201ENST00000619826 254 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.61-201ENST00000362835 102 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 LAP3P1-201ENST00000403648 294 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AL139397.2-201ENST00000404529 772 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.615-201ENST00000410769 117 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 BX323014.1-201ENST00000412876 237 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC080125.1-201ENST00000414888 684 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 RPL23AP46-201ENST00000438548 490 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AF228730.2-201ENST00000438784 848 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC104058.1-201ENST00000448028 297 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 RNU6-1208P-201ENST00000459588 107 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.654-201ENST00000497848 106 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 FGF7P4-201ENST00000509595 295 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 FAM206BP-201ENST00000510179 541 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AL359273.1-201ENST00000510918 627 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 IGKV2D-23-201ENST00000518179 286 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 NARSP2-201ENST00000518524 679 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AL118558.2-201ENST00000556294 238 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC087477.6-201ENST00000559595 843 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 MTCO3P23-201ENST00000561363 289 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 VN1R80P-201ENST00000597126 338 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AP001330.4-201ENST00000604350 154 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC005344.1-201ENST00000613391 459 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AL359697.1-201ENST00000624879 587 ntBASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85CA6NKD9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 MTND4P35-201ENST00000604257 1375 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.142-201ENST00000363491 102 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 RNU6-1127P-201ENST00000384580 107 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 HSPE1P12-201ENST00000412576 301 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 EEF1A1P40-201ENST00000412883 573 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC097713.2-201ENST00000430199 356 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 RPL7P12-201ENST00000446719 750 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 RPS20P22-201ENST00000473700 357 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 TRBV1-201ENST00000476502 284 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC104164.2-201ENST00000496953 495 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 EIF4BP1-201ENST00000554881 351 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 RPL23AP87-202ENST00000573039 466 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 LARP7P3-201ENST00000579888 337 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 MIR4719-201ENST00000585233 84 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 AC009570.1-201ENST00000609599 745 ntBASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC85CA6NKD9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC073544.1-201ENST00000600110 1595 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms