Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
LINC01546A6NGU7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC110792.3-201ENST00000595906 1614 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 DNAJC19P6-201ENST00000401853 280 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 RPL37P10-201ENST00000412884 288 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 HMGB3P12-201ENST00000438745 556 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 RPS4XP11-201ENST00000446897 772 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 TRBV12-1-201ENST00000479785 344 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 MLLT10P2-201ENST00000506434 249 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 NPM1P52-201ENST00000518264 846 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 RPL21P5-201ENST00000554662 472 ntBASIC0.58□□□□□ -2.32
LINC01546A6NGU7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
LINC01546A6NGU7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC005539.1-201ENST00000443768 1479 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 U8.10-201ENST00000384260 133 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 CYCSP48-201ENST00000417124 323 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AL358075.3-201ENST00000426289 226 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AL590762.3-201ENST00000436372 640 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 RPL31P60-201ENST00000478450 367 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 SNORA26.10-201ENST00000516427 141 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AP001804.3-201ENST00000525146 880 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 OR4P1P-201ENST00000530808 1136 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC025811.1-201ENST00000604312 472 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC025588.2-201ENST00000604851 466 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 BNIP3P4-201ENST00000604946 565 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC008945.2-201ENST00000606056 604 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AC139769.3-201ENST00000618383 175 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AP002791.1-201ENST00000623291 381 ntBASIC0.57□□□□□ -2.32
LINC01546A6NGU7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
LINC01546A6NGU7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 SDAD1P2-201ENST00000441308 2028 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 RNU6-338P-201ENST00000383888 105 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AC245047.4-201ENST00000433189 144 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 PRPS1P1-201ENST00000445305 876 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 BX322784.1-201ENST00000455793 1077 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 RNU6-775P-201ENST00000459318 96 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AC117522.2-201ENST00000510049 657 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 RNU6-362P-201ENST00000516736 90 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AP003717.3-201ENST00000544832 1180 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AL078605.1-201ENST00000603529 500 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 HSPE1P7-201ENST00000604681 321 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 DUXAP10-204ENST00000612052 616 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC0.56□□□□□ -2.32
LINC01546A6NGU7 AL136313.1-201ENST00000624804 202 ntBASIC0.56□□□□□ -2.32
LINC01546A6NGU7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 SNORA11-201ENST00000408789 128 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 RNU4-74P-201ENST00000411280 161 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 ELOCP11-201ENST00000436690 332 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 MTCYBP34-201ENST00000439552 670 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 ELOCP16-201ENST00000444494 332 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 RPS15AP27-201ENST00000449183 343 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC009474.2-201ENST00000451383 136 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 MRPS36P2-201ENST00000512569 299 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC118273.2-201ENST00000532092 465 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC011260.1-201ENST00000578420 472 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01546A6NGU7 AC103710.4-201ENST00000609301 899 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC0.55□□□□□ -2.32
LINC01546A6NGU7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
LINC01546A6NGU7 RNU6-457P-201ENST00000363999 107 ntBASIC0.54□□□□□ -2.32
LINC01546A6NGU7 Y_RNA.500-201ENST00000384466 111 ntBASIC0.54□□□□□ -2.32
LINC01546A6NGU7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms