Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-488P-201ENST00000515918 99 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-1095P-201ENST00000516148 108 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-798P-201ENST00000516912 103 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AC011374.2-201ENST00000607135 526 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AP002826.1-201ENST00000608835 315 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 MIR6845-201ENST00000613182 61 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 RNU1-148P-201ENST00000384472 162 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-1035P-201ENST00000384477 107 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 RNU4-26P-201ENST00000410270 107 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AL109913.1-201ENST00000421173 514 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AL353729.1-201ENST00000425044 720 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC012497.1-201ENST00000429392 575 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 RPL23AP6-201ENST00000446637 472 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AL589880.1-201ENST00000448271 287 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC087884.1-201ENST00000469738 328 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC025181.1-201ENST00000477507 416 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 RNU1-103P-201ENST00000516502 125 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 SNORA31.24-201ENST00000517232 57 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC022616.2-201ENST00000523185 300 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC115989.2-201ENST00000578640 563 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC243960.4-201ENST00000600532 288 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 AC091834.1-201ENST00000614543 472 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
TCRBV3S1A0A5B6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 CISD1P1-201ENST00000393907 327 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AL033519.2-201ENST00000403958 392 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 SNORA11.1-201ENST00000408133 129 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-955P-201ENST00000410497 104 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 VTA1P1-201ENST00000414044 866 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 VN1R36P-201ENST00000414936 291 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC096920.1-201ENST00000423991 241 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC093106.2-201ENST00000428212 385 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 FABP5P3-201ENST00000437960 408 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 MTCO3P17-201ENST00000443775 513 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 UBL5P3-201ENST00000475112 231 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC104108.1-201ENST00000509930 412 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 snoZ278.1-201ENST00000517059 112 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 CBX3P7-201ENST00000532876 502 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 MIR3683-201ENST00000580847 82 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC093838.1-201ENST00000613014 469 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC109454.4-201ENST00000623411 649 ntBASIC1.26□□□□□ -2.21
TCRBV3S1A0A5B6 AC010329.5-201ENST00000623497 2174 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 ZNF72P-201ENST00000425869 1908 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 SNORD114-1-201ENST00000362705 72 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-1159P-201ENST00000362933 107 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 SNORA51.12-201ENST00000384448 134 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 UBE2V1P2-201ENST00000397758 440 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL133384.1-201ENST00000412744 351 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL035410.1-201ENST00000427409 427 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC016691.1-201ENST00000441321 413 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC068135.1-201ENST00000446164 246 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC015724.1-201ENST00000478577 156 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC021146.2-201ENST00000504736 556 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 SNORA25.15-201ENST00000516487 89 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 MTCYBP23-201ENST00000558717 1102 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 LINC00933-203ENST00000559812 219 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 SUMO2P14-201ENST00000604488 293 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL022099.1-201ENST00000604551 712 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC073308.1-201ENST00000623696 305 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL109659.3-201ENST00000624985 950 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AC068620.4-201ENST00000636730 1182 ntBASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms