Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 U3.12-201ENST00000364498 214 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-432P-201ENST00000384196 109 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-1257P-201ENST00000384625 110 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 TAS2R15P-201ENST00000390674 928 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-754P-201ENST00000391166 107 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU2-49P-201ENST00000410666 184 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL513331.1-201ENST00000411908 397 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MTND1P21-201ENST00000412991 285 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC104389.3-201ENST00000445629 235 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MEMO1P3-201ENST00000459811 302 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MTND1P16-201ENST00000465177 898 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RN7SL297P-201ENST00000483161 293 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC090096.1-201ENST00000489168 390 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNA5SP320-201ENST00000516263 124 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC021451.1-201ENST00000523498 1129 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC009097.3-201ENST00000563557 1018 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MIR4513-201ENST00000581077 86 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AF038458.1-201ENST00000588406 262 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL357094.1-201ENST00000603845 844 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC136601.2-201ENST00000604356 474 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC007621.1-201ENST00000604544 437 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 PART1_2.1-201ENST00000612397 250 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC068057.2-201ENST00000624047 895 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC099063.3-201ENST00000642066 185 ntBASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRBV11-1A0A0K0K1C0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-289P-201ENST00000364093 107 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RN7SKP226-201ENST00000364912 300 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU1-100P-201ENST00000365255 165 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU1-138P-201ENST00000384093 164 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RPL23AP29-201ENST00000397284 453 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MIR1284-201ENST00000408337 120 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC080125.1-201ENST00000414888 684 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 UBE2FP1-201ENST00000416536 447 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 HMGB1P49-201ENST00000418882 569 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL451054.2-201ENST00000420896 202 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RPL35AP22-201ENST00000436855 335 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC024589.1-201ENST00000512207 263 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RN7SKP24-201ENST00000515888 284 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC010376.1-201ENST00000522101 334 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC009163.5-201ENST00000575421 637 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 BNIP3P27-201ENST00000599991 412 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL138478.1-201ENST00000612252 832 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 TUG1_2.1-201ENST00000614234 87 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 LINC02211-204ENST00000642024 1070 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 Z82195.2-201ENST00000612348 18351 ntBASIC2.35□□□□□ -2.03
TRBV11-1A0A0K0K1C0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU4-82P-201ENST00000362443 140 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-560P-201ENST00000364007 108 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-744P-201ENST00000365557 107 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-413P-201ENST00000384115 107 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-1316P-201ENST00000384242 108 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-443P-201ENST00000384780 107 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 RNU6-1000P-201ENST00000391066 106 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MIR888-201ENST00000401186 77 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL590084.2-201ENST00000401481 382 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SUMO1P4-201ENST00000429430 302 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 SNRPEP7-201ENST00000438350 220 ntBASIC2.34□□□□□ -2.03
TRBV11-1A0A0K0K1C0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms