Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 AL355375.2-201ENST00000574825 175 ntBASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 MIR5692A1-201ENST00000580523 69 ntBASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 FAM27D1-201ENST00000612308 341 ntBASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 OTUD4P1-201ENST00000237841 3067 ntBASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC163A0A0D9SF12 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC106871.1-201ENST00000568324 3102 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 MIR372-201ENST00000362225 67 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 Y_RNA.813-201ENST00000364639 102 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 EIF4E2P1-201ENST00000393781 255 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 CTSL3P-202ENST00000412179 788 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AL590383.1-201ENST00000428602 75 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC007389.2-201ENST00000434630 306 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 PIGFP3-201ENST00000441918 722 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 HMGN2P16-201ENST00000456802 261 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 RPL21P41-201ENST00000459863 264 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC087588.1-201ENST00000462203 316 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 RN7SL542P-201ENST00000467147 294 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC104136.1-201ENST00000512969 394 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 RNU2-69P-201ENST00000516061 100 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 Y_RNA.682-201ENST00000516457 100 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 RNA5SP290-201ENST00000517133 127 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC090136.1-201ENST00000520009 240 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC004024.1-201ENST00000549244 247 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 RN7SL600P-201ENST00000581811 299 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC053481.4-201ENST00000583164 216 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC012119.1-201ENST00000603184 222 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC021646.1-201ENST00000605469 484 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 SNORD91B-202ENST00000608459 222 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC107294.1-201ENST00000609524 467 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 MIR6867-201ENST00000610636 67 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AC006026.1-201ENST00000444025 1803 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 AF117829.1-206ENST00000621883 3802 ntBASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC163A0A0D9SF12 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CCDC163A0A0D9SF12 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CCDC163A0A0D9SF12 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC163A0A0D9SF12 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CCDC163A0A0D9SF12 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 RNU6-45P-201ENST00000384471 107 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 Y_RNA.509-201ENST00000384506 99 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 Y_RNA.535-201ENST00000384612 99 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 MIR493-201ENST00000385254 89 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 PTMAP2-201ENST00000397627 327 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 RPL21P109-201ENST00000422213 475 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 NDUFA5P4-201ENST00000436704 385 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AL358232.1-201ENST00000448030 501 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AL160314.1-201ENST00000490836 438 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC009901.1-201ENST00000506703 541 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 HMGB3P15-201ENST00000507326 574 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 FGF7P4-201ENST00000509595 295 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 SNORA19.2-201ENST00000516013 114 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 SYF2P1-201ENST00000550658 413 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms