Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 ZNF285B-201ENST00000561698 1767 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 Y_RNA.184-201ENST00000363884 108 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RN7SKP227-201ENST00000364445 330 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 Y_RNA.414-201ENST00000384011 101 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 Y_RNA.534-201ENST00000384599 112 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNU2-71P-201ENST00000411395 189 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL157831.1-201ENST00000426134 473 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC092017.2-201ENST00000427600 362 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL669831.1-202ENST00000428504 417 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 GTF2IP13-201ENST00000438487 386 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AF228730.2-201ENST00000438784 848 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 PPP1R2P5-201ENST00000457256 603 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNU7-66P-201ENST00000459469 62 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RPL7AP28-201ENST00000464513 571 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 DYNLL1P5-201ENST00000467158 270 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC103987.1-201ENST00000473394 348 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RPS20P22-201ENST00000473700 357 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RN7SL691P-201ENST00000494487 301 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 SUMO2P6-201ENST00000505273 288 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC009901.1-201ENST00000506703 541 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 TBCAP3-201ENST00000512475 312 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNU2-69P-201ENST00000516061 100 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNU6-189P-201ENST00000516120 101 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 Y_RNA.675-201ENST00000516389 149 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AP001804.3-201ENST00000525146 880 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 MTND6P33-201ENST00000571794 183 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL161798.1-201ENST00000604630 131 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC087045.1-201ENST00000605856 382 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC103710.3-201ENST00000608157 948 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC107294.1-201ENST00000609524 467 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL132765.2-201ENST00000610812 351 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 U2.17-201ENST00000611454 95 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 FAM27D1-201ENST00000612308 341 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC009233.1-201ENST00000616477 371 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL138721.1-201ENST00000616756 179 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL512643.1-201ENST00000635735 524 ntBASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
IGHV4-28A0A0C4DH34 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNU6-50P-201ENST00000362356 103 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNA5SP52-201ENST00000362448 134 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNA5SP28-201ENST00000363841 119 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 SNORA4.3-201ENST00000365564 137 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNU6-434P-201ENST00000384376 107 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 Y_RNA.509-201ENST00000384506 99 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 MIR493-201ENST00000385254 89 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 RPS4XP7-201ENST00000406274 780 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 RNA5SP129-201ENST00000410276 118 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 CRYBB2P1-203ENST00000415709 538 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 USP9YP20-201ENST00000419224 558 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 MTND4P28-201ENST00000426217 387 ntBASIC3.07□□□□□ -1.92
IGHV4-28A0A0C4DH34 AC004975.1-201ENST00000428733 208 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms