Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 AL158211.4-201ENST00000606988 584 ntBASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 uc_338.12-201ENST00000616344 181 ntBASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 AC139792.3-201ENST00000623525 224 ntBASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 AC006386.2-201ENST00000624491 75 ntBASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 AC012005.1-201ENST00000624575 75 ntBASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAI2Q9Y5P3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AL133383.2-201ENST00000622958 2336 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AL365440.1-201ENST00000436135 2167 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MTND5P3-201ENST00000438536 1800 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 FRG1CP-201ENST00000358464 769 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 RNU6-1283P-201ENST00000365314 105 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MIR124-3-201ENST00000384866 87 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MIR19A-201ENST00000384878 82 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 USP9YP27-201ENST00000418455 438 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 RPS12P23-201ENST00000419579 400 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 BX842559.1-201ENST00000419615 532 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 OR4K11P-201ENST00000431829 904 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 GPR143P-201ENST00000434155 205 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MTATP6P23-201ENST00000440153 476 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 WASF1P1-201ENST00000447560 1131 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 HMGB1P25-201ENST00000468402 607 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC022616.3-201ENST00000523940 148 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC109635.3-201ENST00000529536 185 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AP000857.1-201ENST00000532151 543 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AL512310.1-201ENST00000548639 172 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AP002360.4-201ENST00000606980 481 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC104458.1-201ENST00000608243 463 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 MIR7851-201ENST00000610611 160 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC245517.5-201ENST00000611529 162 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAI2Q9Y5P3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 OR1S2-201ENST00000302592 978 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 MIR423-201ENST00000362201 94 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 RNY4P14-201ENST00000363656 96 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AMD1P2-201ENST00000412936 992 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 OR1AA1P-201ENST00000419597 916 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC005300.1-201ENST00000428401 373 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC005326.1-201ENST00000429197 123 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 HMGB3P12-201ENST00000438745 556 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC079781.2-201ENST00000446424 169 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 RPL23AP20-201ENST00000447965 421 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC022364.2-201ENST00000457963 554 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AL049714.1-201ENST00000466686 347 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC116353.2-201ENST00000505332 712 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC026784.1-201ENST00000507986 352 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC021146.1-201ENST00000511202 716 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AC103843.2-201ENST00000530523 682 ntBASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAI2Q9Y5P3 AL157687.1-201ENST00000554853 619 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms