Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC025449.1-201ENST00000603896 529 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC106900.2-201ENST00000604994 317 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC092954.2-201ENST00000609103 430 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC090517.2-201ENST00000614966 680 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC002076.2-201ENST00000617362 122 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC006111.3-201ENST00000622137 383 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 OR4G2P-202ENST00000641004 1759 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 OR4G2P-201ENST00000328113 903 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-1120P-201ENST00000362988 108 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RNA5SP51-201ENST00000364750 119 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 SNORA73.2-201ENST00000364946 201 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RNA5SP424-201ENST00000390988 115 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 BTF3P7-201ENST00000407097 488 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 SNORA11-201ENST00000408789 128 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RN7SKP140-201ENST00000411196 284 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RPL23AP20-201ENST00000447965 421 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RPS20P20-201ENST00000460498 340 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC006512.1-201ENST00000468816 291 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 RNU1-45P-201ENST00000517191 141 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 MIR3921-201ENST00000577308 85 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 BDH2P1-201ENST00000602288 736 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AL121992.2-201ENST00000606262 256 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 AC005183.1-201ENST00000603687 1979 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 ELF2P3-201ENST00000445099 1506 ntBASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLDN16Q9Y5I7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 RNA5SP322-201ENST00000363617 119 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 RNU1-101P-201ENST00000391171 127 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AL590704.1-201ENST00000402856 794 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 YPEL5P1-201ENST00000419731 367 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 UBE2V1P8-201ENST00000437166 265 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 HMGB3P12-201ENST00000438745 556 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AL133547.1-201ENST00000448546 220 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC027673.1-201ENST00000456245 405 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC013267.1-201ENST00000458227 267 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 HMGN2P13-201ENST00000476476 274 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 RNU1-95P-201ENST00000516357 160 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 RNU1-128P-201ENST00000516704 160 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-711P-201ENST00000517255 106 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AP003072.2-201ENST00000527756 676 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC008011.1-201ENST00000545989 227 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AL512360.1-201ENST00000555346 234 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AP001094.1-201ENST00000579805 193 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 DPPA3P3-201ENST00000603842 430 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AC008962.1-201ENST00000605729 304 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN16Q9Y5I7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CLDN16Q9Y5I7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CLDN16Q9Y5I7 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.85
CLDN16Q9Y5I7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms