Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AC051619.2-201ENST00000559063 397 ntBASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB3Q9Y5E6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 SNORD115-32-201ENST00000364079 82 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 RNU6-336P-201ENST00000364891 107 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 RNU4-17P-201ENST00000365598 141 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 RNU6-741P-201ENST00000383889 107 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 RNU6-429P-201ENST00000384582 108 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 OR3A2-201ENST00000408891 1076 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 ELOCP19-201ENST00000411919 318 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 AC090616.3-201ENST00000582184 217 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 AC234771.5-201ENST00000600161 514 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 RNA5SP440-201ENST00000612665 119 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 AP001005.3-201ENST00000622049 129 ntBASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB3Q9Y5E6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 STX3-208ENST00000641815 3236 ntBASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 ZNF204P-201ENST00000416749 2397 ntBASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
PCDHB3Q9Y5E6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AP005435.3-201ENST00000531260 3198 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 RNU6-275P-201ENST00000364910 107 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 RNU6-968P-201ENST00000384076 107 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 SNORA36C-201ENST00000384289 132 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 MIR10A-201ENST00000385043 110 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 ADAM24P-201ENST00000398655 2101 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 EBAG9P1-201ENST00000418955 543 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AL627311.1-201ENST00000431514 115 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 RPL12P39-201ENST00000455456 496 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AC010547.6-201ENST00000571789 193 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 AL589674.2-201ENST00000604304 337 ntBASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB3Q9Y5E6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB3Q9Y5E6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms