Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 SNORA48.10-201ENST00000516965 160 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 COX6B1P6-201ENST00000522347 255 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 HMGB1P14-201ENST00000557424 591 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC068135.2-201ENST00000569293 1028 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC011260.1-201ENST00000578420 472 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC021755.4-201ENST00000616620 456 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 ZNF72P-201ENST00000425869 1908 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC008555.8-201ENST00000623602 2168 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 RNA5SP125-201ENST00000364843 120 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 SNORA51.12-201ENST00000384448 134 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 UBE2V1P2-201ENST00000397758 440 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 RPL23AP6-201ENST00000446637 472 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 RPS15AP36-201ENST00000492022 382 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 RNF138P1-201ENST00000502765 546 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC015720.1-201ENST00000565251 277 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AC243960.4-201ENST00000600532 288 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 MIR6845-201ENST00000613182 61 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 AL353748.2-201ENST00000622148 471 ntBASIC1.23□□□□□ -2.21
AP4S1Q9Y587 MTND4P8-201ENST00000514997 1362 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 RNU6-60P-201ENST00000364792 103 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 RNU6-452P-201ENST00000384406 107 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 RSL24D1P4-201ENST00000400938 484 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 RNU4-26P-201ENST00000410270 107 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 RNU2-41P-201ENST00000410991 178 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 VN1R36P-201ENST00000414936 291 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 RPL36P19-201ENST00000430744 301 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 UBE2V2P4-201ENST00000447495 259 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 MTND4LP3-201ENST00000468320 276 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 SNORA26.10-201ENST00000516427 141 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AP003033.1-201ENST00000527244 415 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AP004247.1-201ENST00000531556 1289 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 ATP5F1P7-201ENST00000567330 760 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 MIR3683-201ENST00000580847 82 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AC005021.1-201ENST00000608730 355 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 AL773524.1-201ENST00000614065 229 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
AP4S1Q9Y587 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.22□□□□□ -2.21
AP4S1Q9Y587 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 SNORD114-1-201ENST00000362705 72 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 RNU4-23P-201ENST00000362839 140 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 UBL5P3-201ENST00000475112 231 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 MTCYBP18-201ENST00000501056 747 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 SCARNA11.3-201ENST00000517276 130 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AC118273.2-201ENST00000532092 465 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 YWHAZP1-201ENST00000556286 722 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 DPRXP5-201ENST00000604662 539 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 SCARNA15.3-201ENST00000626315 122 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 SCARNA4.1-201ENST00000628597 123 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AP003399.1-201ENST00000637534 361 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 TPTE2P4-201ENST00000258589 1605 ntBASIC1.21□□□□□ -2.22
AP4S1Q9Y587 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.21□□□□□ -2.22
AP4S1Q9Y587 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 RNU6-1197P-201ENST00000391183 107 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 PAICSP7-201ENST00000419829 962 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC099677.1-201ENST00000420575 175 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AL009174.1-201ENST00000426577 416 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms