Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LSM4Q9Y4Z0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 UBE2L2-201ENST00000254302 429 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 RNY4P14-201ENST00000363656 96 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-288P-201ENST00000363690 104 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 SNORA62.1-201ENST00000364287 154 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 FAT1P1-201ENST00000406588 507 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 RNA5SP36-201ENST00000410197 133 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL451062.2-201ENST00000427515 271 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 RPL7P54-201ENST00000438336 674 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 PIGFP3-201ENST00000441918 722 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 RN7SL542P-201ENST00000467147 294 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC022690.1-201ENST00000526681 550 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AK6P1-201ENST00000540219 478 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 ADI1P3-201ENST00000549509 470 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC027807.1-201ENST00000559921 996 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC008521.1-201ENST00000587471 187 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC025165.5-201ENST00000602802 578 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC098826.3-201ENST00000603823 466 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC007621.1-201ENST00000604544 437 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL161798.1-201ENST00000604630 131 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL359547.2-201ENST00000615810 418 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AC011155.2-201ENST00000623202 216 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 MIR1321-201ENST00000637766 79 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AL049641.1-201ENST00000441055 1948 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 AF117829.1-206ENST00000621883 3802 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 MAPK10-373ENST00000641983 6772 ntBASIC3.22□□□□□ -1.89
LSM4Q9Y4Z0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
LSM4Q9Y4Z0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.89
LSM4Q9Y4Z0 Z82217.1-201ENST00000625157 8149 ntBASIC3.21□□□□□ -1.89
LSM4Q9Y4Z0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC103710.2-202ENST00000641454 2853 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNA5SP295-201ENST00000362655 121 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.402-201ENST00000383972 102 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-190P-201ENST00000384154 102 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.450-201ENST00000384198 113 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 SNORA1.3-201ENST00000384676 136 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MIR554-201ENST00000384874 96 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-780P-201ENST00000391030 104 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 HMGN2P8-201ENST00000391458 268 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 HSPE1P8-201ENST00000406997 288 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 CALM2P2-201ENST00000428512 440 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC007919.1-201ENST00000429380 217 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AL591212.2-201ENST00000433923 257 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RPL23AP46-201ENST00000438548 490 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 Z82210.1-201ENST00000440037 231 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 MTND1P18-201ENST00000448191 573 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 FDX1P2-201ENST00000450769 375 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 FABP5P13-201ENST00000452144 328 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNA5SP246-201ENST00000458909 119 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RNU7-63P-201ENST00000459054 62 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RPL37P6-201ENST00000460682 294 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 GMFBP1-201ENST00000467831 427 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 KC877373.1-201ENST00000479066 408 ntBASIC3.21□□□□□ -1.9
LSM4Q9Y4Z0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms